Analysis of interatomic Contacts of Structural Units in PDB entry:
7FCB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FCB entry

There is 1 chain in PDB entry 7FCB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 PRO 4LEU 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7FCB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
14 26Right-handed alpha
Helix 2
AA2
C
35 53Right-handed alpha
Helix 3
AA3
C
66 71Right-handed alpha
Helix 4
AA4
C
71 77Right-handed alpha
Helix 5
AA5
C
78 80Right-handed 310
Helix 6
AA6
C
81 97Right-handed alpha
Helix 7
AA7
C
120 130Right-handed 310
Helix 8
AA8
C
161 165Right-handed 310
Helix 9
AA9
C
173 177Right-handed 310
Helix 10
AB1
C
229 235Right-handed alpha
Helix 11
AB2
C
237 244Right-handed alpha
Helix 12
AB3
C
265 269Right-handed alpha
Helix 13
AB4
C
277 282Right-handed alpha
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There are 5 sheets in PDB entry 7FCB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 9first strand
Strand 2
C
28 30parallel
Strand 3
C
187 191anti-parallel
Strand 4
C
140 145anti-parallel
Strand 5
C
207 216anti-parallel
Strand 6
C
106 109anti-parallel
Strand 7
C
61 62anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 9first strand
Strand 2
C
28 30parallel
Strand 3
C
187 191anti-parallel
Strand 4
C
140 145anti-parallel
Strand 5
C
207 216anti-parallel
Strand 6
C
99 101anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
178 179first strand
Strand 2
C
157 158anti-parallel
Strand 3
C
196 197anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
249 250first strand
Strand 2
C
256 257anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
259 260first strand
Strand 2
C
263 264anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il