Analysis of interatomic Contacts of Structural Units in PDB entry:
7FCM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FCM entry

There are 2 chains in PDB entry 7FCM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -1MET 266
B
 GLN -1MET 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7FCM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 30Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
66 82Right-handed alpha
Helix 4
AA4
A
100 105Right-handed 310
Helix 5
AA5
A
107 112Right-handed alpha
Helix 6
AA6
A
113 125Right-handed alpha
Helix 7
AA7
A
125 143Right-handed alpha
Helix 8
AA8
A
151 155Right-handed 310
Helix 9
AA9
A
162 183Right-handed alpha
Helix 10
AB1
A
184 186Right-handed 310
Helix 11
AB2
A
199 204Right-handed alpha
Helix 12
AB3
A
207 219Right-handed alpha
Helix 13
AB4
A
226 239Right-handed alpha
Helix 14
AB5
A
240 243Right-handed 310
Helix 15
AB6
A
255 259Right-handed 310
Helix 16
AB7
B
18 30Right-handed alpha
Helix 17
AB8
B
40 55Right-handed alpha
Helix 18
AB9
B
66 82Right-handed alpha
Helix 19
AC1
B
100 105Right-handed 310
Helix 20
AC2
B
107 112Right-handed alpha
Helix 21
AC3
B
113 125Right-handed alpha
Helix 22
AC4
B
125 143Right-handed alpha
Helix 23
AC5
B
151 155Right-handed 310
Helix 24
AC6
B
162 183Right-handed alpha
Helix 25
AC7
B
184 186Right-handed 310
Helix 26
AC8
B
199 204Right-handed alpha
Helix 27
AC9
B
207 219Right-handed alpha
Helix 28
AD1
B
226 239Right-handed alpha
Helix 29
AD2
B
240 243Right-handed 310
Helix 30
AD3
B
255 259Right-handed 310
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There are 2 sheets in PDB entry 7FCM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
33 38parallel
Strand 3
A
7 10parallel
Strand 4
A
91 94parallel
Strand 5
A
145 150parallel
Strand 6
A
188 194parallel
Strand 7
A
249 252parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 61first strand
Strand 2
B
33 38parallel
Strand 3
B
7 10parallel
Strand 4
B
91 94parallel
Strand 5
B
145 150parallel
Strand 6
B
188 194parallel
Strand 7
B
249 252parallel
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