Analysis of interatomic Contacts of Structural Units in PDB entry:
7FDF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FDF entry

There is 1 chain in PDB entry 7FDF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 89GLU 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7FDF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 103Right-handed alpha
Helix 2
AA2
A
103 115Right-handed alpha
Helix 3
AA3
A
126 136Right-handed alpha
Helix 4
AA4
A
171 175Right-handed 310
Helix 5
AA5
A
179 186Right-handed alpha
Helix 6
AA6
A
195 205Right-handed alpha
Helix 7
AA7
A
206 209Right-handed 310
Helix 8
AA8
A
220 230Right-handed alpha
Helix 9
AA9
A
242 249Right-handed alpha
Helix 10
AB1
A
278 286Right-handed alpha
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There are 2 sheets in PDB entry 7FDF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
91 95parallel
Strand 3
A
141 145parallel
Strand 4
A
261 270anti-parallel
Strand 5
A
153 167anti-parallel
Strand 6
A
234 238anti-parallel
Strand 7
A
188 190parallel
Strand 8
A
216 217parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
91 95parallel
Strand 3
A
141 145parallel
Strand 4
A
261 270anti-parallel
Strand 5
A
153 167anti-parallel
Strand 6
A
252 253anti-parallel
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