Analysis of interatomic Contacts of Structural Units in PDB entry:
7FEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FEJ entry

There are 6 chains in PDB entry 7FEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 THR 1LYS 210
2
 ARG 13LYS 217
3
 GLY 1SER 220
4
 SER 15LEU 84
H
 SER 15TYR 112
L
 ALA 4LEU 112
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7FEJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
14 19Right-handed 310
Helix 2
AA2
1
60 68Right-handed alpha
Helix 3
AA3
1
94 100Right-handed 310
Helix 4
AA4
1
159 163Right-handed 310
Helix 5
AA5
2
47 51Right-handed 310
Helix 6
AA6
2
89 97Right-handed alpha
Helix 7
AA7
3
43 51Right-handed alpha
Helix 8
AA8
3
89 96Right-handed alpha
Helix 9
AA9
4
27 32Right-handed alpha
Helix 10
AB1
4
66 74Right-handed alpha
Helix 11
AB2
H
105 110Right-handed alpha
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There are 13 sheets in PDB entry 7FEJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
40 42first strand
Strand 2
1
172 187anti-parallel
Strand 3
1
69 82anti-parallel
Strand 4
1
113 117anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
105 106first strand
Strand 2
1
86 89anti-parallel
Strand 3
1
166 168anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
15 19first strand
Strand 2
2
22 26anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
32 34first strand
Strand 2
2
155 160parallel
Strand 3
2
98 111anti-parallel
Strand 4
2
196 213anti-parallel
Strand 5
2
65 70anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
79 80first strand
Strand 2
2
177 185anti-parallel
Strand 3
2
120 127anti-parallel
Strand 4
2
145 148anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
53 54first strand
Strand 2
3
199 206anti-parallel
Strand 3
3
105 112anti-parallel
Strand 4
3
155 156anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
53 54first strand
Strand 2
3
199 206anti-parallel
Strand 3
3
105 112anti-parallel
Strand 4
3
159 160anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
75 78first strand
Strand 2
3
184 192anti-parallel
Strand 3
3
119 126anti-parallel
Strand 4
3
145 149anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
169 170first strand
Strand 2
3
98 102anti-parallel
Strand 3
3
211 215anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
19 21first strand
Strand 2
H
77 81anti-parallel
Strand 3
H
69 72anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
57 58first strand
Strand 2
H
46 51anti-parallel
Strand 3
H
34 39anti-parallel
Strand 4
H
92 97anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
20 23first strand
Strand 2
L
75 78anti-parallel
Strand 3
L
66 68anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
49 51first strand
Strand 2
L
36 41anti-parallel
Strand 3
L
88 93anti-parallel
Strand 4
L
102 103anti-parallel
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