Analysis of interatomic Contacts of Structural Units in PDB entry:
7FF4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FF4 entry

There are 4 chains in PDB entry 7FF4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 58LYS 337
B
 GLY 60LYS 337
C
 SER 59LYS 337
D
 LYS 58LYS 337
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7FF4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 88Right-handed alpha
Helix 2
AA2
A
100 113Right-handed alpha
Helix 3
AA3
A
125 127Right-handed 310
Helix 4
AA4
A
128 138Right-handed alpha
Helix 5
AA5
A
160 175Right-handed alpha
Helix 6
AA6
A
189 206Right-handed alpha
Helix 7
AA7
A
211 213Right-handed 310
Helix 8
AA8
A
223 234Right-handed alpha
Helix 9
AA9
A
246 260Right-handed alpha
Helix 10
AB1
A
275 280Right-handed 310
Helix 11
AB2
A
295 313Right-handed alpha
Helix 12
AB3
B
73 88Right-handed alpha
Helix 13
AB4
B
100 113Right-handed alpha
Helix 14
AB5
B
125 127Right-handed 310
Helix 15
AB6
B
128 138Right-handed alpha
Helix 16
AB7
B
160 175Right-handed alpha
Helix 17
AB8
B
189 206Right-handed alpha
Helix 18
AB9
B
211 213Right-handed 310
Helix 19
AC1
B
223 234Right-handed alpha
Helix 20
AC2
B
246 260Right-handed alpha
Helix 21
AC3
B
276 281Right-handed alpha
Helix 22
AC4
B
295 313Right-handed alpha
Helix 23
AC5
C
73 88Right-handed alpha
Helix 24
AC6
C
100 113Right-handed alpha
Helix 25
AC7
C
125 127Right-handed 310
Helix 26
AC8
C
128 138Right-handed alpha
Helix 27
AC9
C
160 175Right-handed alpha
Helix 28
AD1
C
189 206Right-handed alpha
Helix 29
AD2
C
211 213Right-handed 310
Helix 30
AD3
C
223 234Right-handed alpha
Helix 31
AD4
C
246 260Right-handed alpha
Helix 32
AD5
C
275 280Right-handed 310
Helix 33
AD6
C
295 313Right-handed alpha
Helix 34
AD7
D
73 88Right-handed alpha
Helix 35
AD8
D
100 113Right-handed alpha
Helix 36
AD9
D
125 127Right-handed 310
Helix 37
AE1
D
128 138Right-handed alpha
Helix 38
AE2
D
160 175Right-handed alpha
Helix 39
AE3
D
189 206Right-handed alpha
Helix 40
AE4
D
211 213Right-handed 310
Helix 41
AE5
D
223 234Right-handed alpha
Helix 42
AE6
D
246 260Right-handed alpha
Helix 43
AE7
D
276 281Right-handed alpha
Helix 44
AE8
D
295 313Right-handed alpha
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There are 8 sheets in PDB entry 7FF4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 96first strand
Strand 2
A
61 66parallel
Strand 3
A
118 122parallel
Strand 4
A
142 145parallel
Strand 5
A
155 159parallel
Strand 6
A
320 323parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
180 183parallel
Strand 3
A
241 244parallel
Strand 4
A
269 273parallel
Strand 5
A
290 293parallel
Strand 6
A
326 328anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 96first strand
Strand 2
B
61 66parallel
Strand 3
B
118 122parallel
Strand 4
B
142 145parallel
Strand 5
B
155 159parallel
Strand 6
B
320 323parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 216first strand
Strand 2
B
180 183parallel
Strand 3
B
241 244parallel
Strand 4
B
269 273parallel
Strand 5
B
290 293parallel
Strand 6
B
326 328anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
91 96first strand
Strand 2
C
61 66parallel
Strand 3
C
118 122parallel
Strand 4
C
142 145parallel
Strand 5
C
155 159parallel
Strand 6
C
320 323parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
215 216first strand
Strand 2
C
180 183parallel
Strand 3
C
241 244parallel
Strand 4
C
269 273parallel
Strand 5
C
290 293parallel
Strand 6
C
326 328anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
91 96first strand
Strand 2
D
61 66parallel
Strand 3
D
118 122parallel
Strand 4
D
142 145parallel
Strand 5
D
155 159parallel
Strand 6
D
320 323parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
215 216first strand
Strand 2
D
180 183parallel
Strand 3
D
241 244parallel
Strand 4
D
269 273parallel
Strand 5
D
290 293parallel
Strand 6
D
326 328anti-parallel
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