Analysis of interatomic Contacts of Structural Units in PDB entry:
7FFP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FFP entry

There is 1 chain in PDB entry 7FFP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7FFP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 24Right-handed 310
Helix 2
AA2
A
25 34Right-handed alpha
Helix 3
AA3
A
49 64Right-handed alpha
Helix 4
AA4
A
72 74Right-handed 310
Helix 5
AA5
A
76 84Right-handed alpha
Helix 6
AA6
A
93 104Right-handed alpha
Helix 7
AA7
A
106 116Right-handed alpha
Helix 8
AA8
A
125 130Right-handed alpha
Helix 9
AA9
A
176 185Right-handed alpha
Helix 10
AB1
A
235 239Right-handed 310
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There are 2 sheets in PDB entry 7FFP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 70first strand
Strand 2
A
39 43parallel
Strand 3
A
87 89parallel
Strand 4
A
121 124parallel
Strand 5
A
7 11parallel
Strand 6
A
200 205anti-parallel
Strand 7
A
208 213anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 163first strand
Strand 2
A
193 197parallel
Strand 3
A
217 220anti-parallel
Strand 4
A
227 229anti-parallel
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