Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7FGA entry

There are 4 chains in PDB entry 7FGA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY -2	THR 342
B	HIS 0	VAL 344
C	GLY -2	THR 342
D	HIS 0	VAL 344

There are 61 helices in PDB entry 7FGA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	35	Right-handed alpha
Helix 2	AA2	A	70	82	Right-handed alpha
Helix 3	AA3	A	84	88	Right-handed 310
Helix 4	AA4	A	96	98	Right-handed 310
Helix 5	AA5	A	99	104	Right-handed alpha
Helix 6	AA6	A	121	129	Right-handed alpha
Helix 7	AA7	A	158	162	Right-handed 310
Helix 8	AA8	A	186	196	Right-handed alpha
Helix 9	AA9	A	210	217	Right-handed alpha
Helix 10	AB1	A	218	222	Right-handed 310
Helix 11	AB2	A	234	244	Right-handed alpha
Helix 12	AB3	A	259	268	Right-handed alpha
Helix 13	AB4	A	296	304	Right-handed alpha
Helix 14	AB5	A	311	322	Right-handed alpha
Helix 15	AB6	A	323	341	Right-handed alpha
Helix 16	AB7	B	20	33	Right-handed alpha
Helix 17	AB8	B	34	36	Right-handed 310
Helix 18	AB9	B	69	82	Right-handed alpha
Helix 19	AC1	B	83	88	Right-handed 310
Helix 20	AC2	B	96	98	Right-handed 310
Helix 21	AC3	B	99	104	Right-handed alpha
Helix 22	AC4	B	122	128	Right-handed alpha
Helix 23	AC5	B	158	162	Right-handed 310
Helix 24	AC6	B	185	197	Right-handed alpha
Helix 25	AC7	B	210	218	Right-handed alpha
Helix 26	AC8	B	219	222	Right-handed 310
Helix 27	AC9	B	234	244	Right-handed alpha
Helix 28	AD1	B	259	268	Right-handed alpha
Helix 29	AD2	B	279	284	Right-handed alpha
Helix 30	AD3	B	295	304	Right-handed alpha
Helix 31	AD4	B	310	322	Right-handed alpha
Helix 32	AD5	B	323	341	Right-handed alpha
Helix 33	AD6	C	19	36	Right-handed alpha
Helix 34	AD7	C	69	82	Right-handed alpha
Helix 35	AD8	C	84	88	Right-handed 310
Helix 36	AD9	C	99	104	Right-handed alpha
Helix 37	AE1	C	122	129	Right-handed alpha
Helix 38	AE2	C	186	197	Right-handed alpha
Helix 39	AE3	C	210	218	Right-handed alpha
Helix 40	AE4	C	219	222	Right-handed 310
Helix 41	AE5	C	234	245	Right-handed alpha
Helix 42	AE6	C	259	268	Right-handed alpha
Helix 43	AE7	C	279	284	Right-handed alpha
Helix 44	AE8	C	296	304	Right-handed alpha
Helix 45	AE9	C	310	322	Right-handed alpha
Helix 46	AF1	C	323	341	Right-handed alpha
Helix 47	AF2	D	20	35	Right-handed alpha
Helix 48	AF3	D	70	82	Right-handed alpha
Helix 49	AF4	D	83	88	Right-handed 310
Helix 50	AF5	D	96	100	Right-handed 310
Helix 51	AF6	D	121	129	Right-handed alpha
Helix 52	AF7	D	158	162	Right-handed 310
Helix 53	AF8	D	185	197	Right-handed alpha
Helix 54	AF9	D	209	218	Right-handed alpha
Helix 55	AG1	D	219	222	Right-handed 310
Helix 56	AG2	D	234	244	Right-handed alpha
Helix 57	AG3	D	259	268	Right-handed alpha
Helix 58	AG4	D	279	284	Right-handed alpha
Helix 59	AG5	D	295	305	Right-handed alpha
Helix 60	AG6	D	310	322	Right-handed alpha
Helix 61	AG7	D	323	341	Right-handed alpha

There are 11 sheets in PDB entry 7FGA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	3	6	parallel
Strand 3	A	90	93	parallel
Strand 4	A	110	113	parallel
Strand 5	A	134	136	parallel
Strand 6	A	149	152	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	175	first strand
Strand 2	A	200	201	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	250	first strand
Strand 2	A	272	275	parallel
Strand 3	A	290	293	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	38	43	parallel
Strand 3	B	2	6	parallel
Strand 4	B	90	93	parallel
Strand 5	B	110	113	parallel
Strand 6	B	133	136	parallel
Strand 7	B	149	152	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	200	201	first strand
Strand 2	B	227	228	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	250	first strand
Strand 2	B	272	275	parallel
Strand 3	B	290	293	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	57	first strand
Strand 2	C	38	44	parallel
Strand 3	C	2	6	parallel
Strand 4	C	90	93	parallel
Strand 5	C	110	113	parallel
Strand 6	C	134	136	parallel
Strand 7	C	149	152	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	200	201	first strand
Strand 2	C	227	228	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	250	first strand
Strand 2	C	272	275	parallel
Strand 3	C	290	293	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	55	first strand
Strand 2	D	38	43	parallel
Strand 3	D	2	6	parallel
Strand 4	D	90	93	parallel
Strand 5	D	110	113	parallel
Strand 6	D	133	136	parallel
Strand 7	D	149	152	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	227	228	first strand
Strand 2	D	200	201	parallel
Strand 3	D	174	175	parallel
Strand 4	D	247	250	parallel
Strand 5	D	272	275	parallel
Strand 6	D	290	293	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7FGA

Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGA