Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7FGB entry

There are 2 chains in PDB entry 7FGB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 80	LEU 466
B	PRO 80	LEU 466

There are 5 helices in PDB entry 7FGB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	101	109	Right-handed alpha
Helix 2	AA2	A	195	198	Right-handed 310
Helix 3	AA3	A	462	466	Right-handed 310
Helix 4	AA4	B	101	109	Right-handed alpha
Helix 5	AA5	B	462	466	Right-handed 310

There are 16 sheets in PDB entry 7FGB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	404	410	first strand
Strand 2	A	417	429	anti-parallel
Strand 3	A	432	443	anti-parallel
Strand 4	A	93	100	anti-parallel
Strand 5	A	451	452	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	115	first strand
Strand 2	A	126	137	anti-parallel
Strand 3	A	119	123	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	115	first strand
Strand 2	A	126	137	anti-parallel
Strand 3	A	154	158	anti-parallel
Strand 4	A	170	174	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	214	first strand
Strand 2	A	200	205	anti-parallel
Strand 3	A	187	193	anti-parallel
Strand 4	A	177	182	anti-parallel
Strand 5	A	226	227	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	223	first strand
Strand 2	A	234	240	anti-parallel
Strand 3	A	229	231	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	223	first strand
Strand 2	A	234	240	anti-parallel
Strand 3	A	251	256	anti-parallel
Strand 4	A	259	265	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	283	first strand
Strand 2	A	286	292	anti-parallel
Strand 3	A	301	306	anti-parallel
Strand 4	A	311	316	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	353	first strand
Strand 2	A	357	362	anti-parallel
Strand 3	A	373	377	anti-parallel
Strand 4	A	389	393	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	410	first strand
Strand 2	B	417	429	anti-parallel
Strand 3	B	432	443	anti-parallel
Strand 4	B	93	100	anti-parallel
Strand 5	B	451	452	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	115	first strand
Strand 2	B	126	137	anti-parallel
Strand 3	B	119	123	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	115	first strand
Strand 2	B	126	137	anti-parallel
Strand 3	B	154	158	anti-parallel
Strand 4	B	170	174	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	208	214	first strand
Strand 2	B	200	205	anti-parallel
Strand 3	B	187	193	anti-parallel
Strand 4	B	177	182	anti-parallel
Strand 5	B	226	227	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	223	first strand
Strand 2	B	234	240	anti-parallel
Strand 3	B	229	231	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	223	first strand
Strand 2	B	234	240	anti-parallel
Strand 3	B	251	256	anti-parallel
Strand 4	B	259	265	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	283	first strand
Strand 2	B	286	292	anti-parallel
Strand 3	B	301	306	anti-parallel
Strand 4	B	311	316	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	353	first strand
Strand 2	B	357	362	anti-parallel
Strand 3	B	373	377	anti-parallel
Strand 4	B	389	393	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7FGB

Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGB