Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FGP entry

There are 2 chains in PDB entry 7FGP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -1ALA 377
B
 ASP 0GLU 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7FGP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 22Right-handed alpha
Helix 2
AA2
A
37 41Right-handed 310
Helix 3
AA3
A
54 72Right-handed alpha
Helix 4
AA4
A
73 75Right-handed 310
Helix 5
AA5
A
103 114Right-handed alpha
Helix 6
AA6
A
122 124Right-handed 310
Helix 7
AA7
A
125 130Right-handed alpha
Helix 8
AA8
A
134 138Right-handed 310
Helix 9
AA9
A
153 170Right-handed alpha
Helix 10
AB1
A
208 210Right-handed 310
Helix 11
AB2
A
211 217Right-handed alpha
Helix 12
AB3
A
218 220Right-handed 310
Helix 13
AB4
A
265 270Right-handed alpha
Helix 14
AB5
A
282 296Right-handed alpha
Helix 15
AB6
A
297 300Right-handed 310
Helix 16
AB7
A
338 357Right-handed alpha
Helix 17
AB8
A
360 372Right-handed 310
Helix 18
AB9
B
9 22Right-handed alpha
Helix 19
AC1
B
37 41Right-handed 310
Helix 20
AC2
B
54 72Right-handed alpha
Helix 21
AC3
B
73 75Right-handed 310
Helix 22
AC4
B
103 115Right-handed alpha
Helix 23
AC5
B
122 130Right-handed alpha
Helix 24
AC6
B
134 138Right-handed 310
Helix 25
AC7
B
153 170Right-handed alpha
Helix 26
AC8
B
208 210Right-handed 310
Helix 27
AC9
B
211 217Right-handed alpha
Helix 28
AD1
B
218 220Right-handed 310
Helix 29
AD2
B
265 270Right-handed alpha
Helix 30
AD3
B
282 296Right-handed alpha
Helix 31
AD4
B
297 300Right-handed 310
Helix 32
AD5
B
316 320Right-handed 310
Helix 33
AD6
B
338 357Right-handed alpha
Helix 34
AD7
B
360 372Right-handed 310
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There are 8 sheets in PDB entry 7FGP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
25 30parallel
Strand 3
A
2 6parallel
Strand 4
A
203 206parallel
Strand 5
A
331 335parallel
Strand 6
A
321 323anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
150 152anti-parallel
Strand 3
A
81 82anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
143 146anti-parallel
Strand 3
A
86 88anti-parallel
Strand 4
A
245 247parallel
Strand 5
A
252 257anti-parallel
Strand 6
A
260 264anti-parallel
Strand 7
A
228 235anti-parallel
Strand 8
A
304 312anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 184first strand
Strand 2
A
187 193anti-parallel
Strand 3
A
198 200anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 175first strand
Strand 2
B
25 30parallel
Strand 3
B
2 6parallel
Strand 4
B
203 206parallel
Strand 5
B
331 335parallel
Strand 6
B
321 324anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 46first strand
Strand 2
B
150 152anti-parallel
Strand 3
B
81 82anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 121first strand
Strand 2
B
143 146anti-parallel
Strand 3
B
86 89anti-parallel
Strand 4
B
245 247parallel
Strand 5
B
252 257anti-parallel
Strand 6
B
260 264anti-parallel
Strand 7
B
228 235anti-parallel
Strand 8
B
304 312anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 184first strand
Strand 2
B
187 193anti-parallel
Strand 3
B
198 200anti-parallel
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