Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7FGW entry

There are 4 chains in PDB entry 7FGW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	MET 606
B	GLN 2	MET 606
C	GLN 2	MET 606
D	MET 1	MET 606

There are 96 helices in PDB entry 7FGW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	41	Right-handed alpha
Helix 2	AA2	A	42	48	Right-handed alpha
Helix 3	AA3	A	81	87	Right-handed alpha
Helix 4	AA4	A	107	115	Right-handed alpha
Helix 5	AA5	A	129	141	Right-handed alpha
Helix 6	AA6	A	153	164	Right-handed alpha
Helix 7	AA7	A	189	193	Right-handed 310
Helix 8	AA8	A	203	208	Right-handed alpha
Helix 9	AA9	A	214	218	Right-handed 310
Helix 10	AB1	A	220	223	Right-handed 310
Helix 11	AB2	A	254	256	Right-handed 310
Helix 12	AB3	A	283	298	Right-handed alpha
Helix 13	AB4	A	298	306	Right-handed alpha
Helix 14	AB5	A	324	338	Right-handed alpha
Helix 15	AB6	A	374	387	Right-handed alpha
Helix 16	AB7	A	392	397	Right-handed alpha
Helix 17	AB8	A	403	407	Right-handed 310
Helix 18	AB9	A	408	415	Right-handed alpha
Helix 19	AC1	A	428	436	Right-handed alpha
Helix 20	AC2	A	453	465	Right-handed alpha
Helix 21	AC3	A	480	484	Right-handed 310
Helix 22	AC4	A	516	536	Right-handed alpha
Helix 23	AC5	A	556	564	Right-handed alpha
Helix 24	AC6	A	578	582	Right-handed 310
Helix 25	AC7	A	584	588	Right-handed 310
Helix 26	AC8	A	589	591	Right-handed 310
Helix 27	AC9	B	28	41	Right-handed alpha
Helix 28	AD1	B	42	47	Right-handed alpha
Helix 29	AD2	B	81	87	Right-handed alpha
Helix 30	AD3	B	107	114	Right-handed alpha
Helix 31	AD4	B	129	141	Right-handed alpha
Helix 32	AD5	B	153	164	Right-handed alpha
Helix 33	AD6	B	189	193	Right-handed 310
Helix 34	AD7	B	214	218	Right-handed 310
Helix 35	AD8	B	220	223	Right-handed 310
Helix 36	AD9	B	283	298	Right-handed alpha
Helix 37	AE1	B	298	308	Right-handed alpha
Helix 38	AE2	B	324	338	Right-handed alpha
Helix 39	AE3	B	374	387	Right-handed alpha
Helix 40	AE4	B	392	397	Right-handed alpha
Helix 41	AE5	B	403	407	Right-handed 310
Helix 42	AE6	B	408	415	Right-handed alpha
Helix 43	AE7	B	428	436	Right-handed alpha
Helix 44	AE8	B	453	465	Right-handed alpha
Helix 45	AE9	B	480	484	Right-handed 310
Helix 46	AF1	B	516	536	Right-handed alpha
Helix 47	AF2	B	556	564	Right-handed alpha
Helix 48	AF3	B	584	588	Right-handed 310
Helix 49	AF4	C	28	41	Right-handed alpha
Helix 50	AF5	C	42	47	Right-handed alpha
Helix 51	AF6	C	81	87	Right-handed alpha
Helix 52	AF7	C	107	115	Right-handed alpha
Helix 53	AF8	C	129	141	Right-handed alpha
Helix 54	AF9	C	153	164	Right-handed alpha
Helix 55	AG1	C	189	193	Right-handed 310
Helix 56	AG2	C	214	218	Right-handed 310
Helix 57	AG3	C	220	223	Right-handed 310
Helix 58	AG4	C	283	298	Right-handed alpha
Helix 59	AG5	C	298	306	Right-handed alpha
Helix 60	AG6	C	324	338	Right-handed alpha
Helix 61	AG7	C	374	387	Right-handed alpha
Helix 62	AG8	C	392	397	Right-handed alpha
Helix 63	AG9	C	403	407	Right-handed 310
Helix 64	AH1	C	408	415	Right-handed alpha
Helix 65	AH2	C	428	436	Right-handed alpha
Helix 66	AH3	C	453	465	Right-handed alpha
Helix 67	AH4	C	480	484	Right-handed 310
Helix 68	AH5	C	516	536	Right-handed alpha
Helix 69	AH6	C	556	564	Right-handed alpha
Helix 70	AH7	C	584	588	Right-handed 310
Helix 71	AH8	D	28	41	Right-handed alpha
Helix 72	AH9	D	43	48	Right-handed alpha
Helix 73	AI1	D	81	86	Right-handed alpha
Helix 74	AI2	D	88	92	Right-handed 310
Helix 75	AI3	D	107	115	Right-handed alpha
Helix 76	AI4	D	129	141	Right-handed alpha
Helix 77	AI5	D	153	164	Right-handed alpha
Helix 78	AI6	D	189	193	Right-handed 310
Helix 79	AI7	D	203	208	Right-handed alpha
Helix 80	AI8	D	214	218	Right-handed 310
Helix 81	AI9	D	220	223	Right-handed 310
Helix 82	AJ1	D	283	298	Right-handed alpha
Helix 83	AJ2	D	298	308	Right-handed alpha
Helix 84	AJ3	D	324	338	Right-handed alpha
Helix 85	AJ4	D	374	387	Right-handed alpha
Helix 86	AJ5	D	392	397	Right-handed alpha
Helix 87	AJ6	D	403	407	Right-handed 310
Helix 88	AJ7	D	408	415	Right-handed alpha
Helix 89	AJ8	D	428	436	Right-handed alpha
Helix 90	AJ9	D	453	465	Right-handed alpha
Helix 91	AK1	D	480	484	Right-handed 310
Helix 92	AK2	D	516	536	Right-handed alpha
Helix 93	AK3	D	556	564	Right-handed alpha
Helix 94	AK4	D	578	582	Right-handed 310
Helix 95	AK5	D	584	588	Right-handed 310
Helix 96	AK6	D	589	591	Right-handed 310

There are 20 sheets in PDB entry 7FGW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	98	102	parallel
Strand 3	A	74	80	parallel
Strand 4	A	145	152	parallel
Strand 5	A	5	11	parallel
Strand 6	A	166	174	parallel
Strand 7	A	241	252	anti-parallel
Strand 8	A	236	238	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	98	102	parallel
Strand 3	A	74	80	parallel
Strand 4	A	145	152	parallel
Strand 5	A	5	11	parallel
Strand 6	A	166	174	parallel
Strand 7	A	241	252	anti-parallel
Strand 8	A	225	232	anti-parallel
Strand 9	A	319	320	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	182	183	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	342	first strand
Strand 2	A	348	360	anti-parallel
Strand 3	A	539	553	anti-parallel
Strand 4	A	502	513	parallel
Strand 5	A	490	497	anti-parallel
Strand 6	A	472	474	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	576	first strand
Strand 2	A	593	596	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	127	first strand
Strand 2	B	98	102	parallel
Strand 3	B	74	80	parallel
Strand 4	B	145	150	parallel
Strand 5	B	5	11	parallel
Strand 6	B	166	174	parallel
Strand 7	B	241	252	anti-parallel
Strand 8	B	236	238	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	127	first strand
Strand 2	B	98	102	parallel
Strand 3	B	74	80	parallel
Strand 4	B	145	150	parallel
Strand 5	B	5	11	parallel
Strand 6	B	166	174	parallel
Strand 7	B	241	252	anti-parallel
Strand 8	B	225	232	anti-parallel
Strand 9	B	319	320	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	18	first strand
Strand 2	B	182	183	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	349	360	anti-parallel
Strand 3	B	539	553	anti-parallel
Strand 4	B	502	513	parallel
Strand 5	B	490	497	anti-parallel
Strand 6	B	472	474	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	573	576	first strand
Strand 2	B	593	596	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	98	102	parallel
Strand 3	C	74	80	parallel
Strand 4	C	145	152	parallel
Strand 5	C	5	11	parallel
Strand 6	C	166	174	parallel
Strand 7	C	241	252	anti-parallel
Strand 8	C	236	238	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	98	102	parallel
Strand 3	C	74	80	parallel
Strand 4	C	145	152	parallel
Strand 5	C	5	11	parallel
Strand 6	C	166	174	parallel
Strand 7	C	241	252	anti-parallel
Strand 8	C	225	232	anti-parallel
Strand 9	C	319	320	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	18	first strand
Strand 2	C	182	183	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	342	first strand
Strand 2	C	348	360	anti-parallel
Strand 3	C	539	553	anti-parallel
Strand 4	C	502	513	parallel
Strand 5	C	490	497	anti-parallel
Strand 6	C	472	474	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	573	576	first strand
Strand 2	C	593	596	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	98	102	parallel
Strand 3	D	74	80	parallel
Strand 4	D	145	152	parallel
Strand 5	D	5	11	parallel
Strand 6	D	166	174	parallel
Strand 7	D	241	252	anti-parallel
Strand 8	D	236	238	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	98	102	parallel
Strand 3	D	74	80	parallel
Strand 4	D	145	152	parallel
Strand 5	D	5	11	parallel
Strand 6	D	166	174	parallel
Strand 7	D	241	252	anti-parallel
Strand 8	D	225	232	anti-parallel
Strand 9	D	319	320	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	18	first strand
Strand 2	D	182	183	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	342	first strand
Strand 2	D	348	360	anti-parallel
Strand 3	D	539	553	anti-parallel
Strand 4	D	502	513	parallel
Strand 5	D	490	497	anti-parallel
Strand 6	D	472	474	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	576	first strand
Strand 2	D	593	596	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7FGW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGW