Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7FGX entry

There are 4 chains in PDB entry 7FGX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	MET 606
B	MET 1	MET 606
C	MET 1	MET 606
D	MET 1	MET 606

There are102 helices in PDB entry 7FGX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	40	Right-handed alpha
Helix 2	AA2	A	42	48	Right-handed alpha
Helix 3	AA3	A	81	87	Right-handed alpha
Helix 4	AA4	A	88	92	Right-handed 310
Helix 5	AA5	A	107	115	Right-handed alpha
Helix 6	AA6	A	129	141	Right-handed alpha
Helix 7	AA7	A	153	164	Right-handed alpha
Helix 8	AA8	A	189	193	Right-handed 310
Helix 9	AA9	A	203	208	Right-handed alpha
Helix 10	AB1	A	214	218	Right-handed 310
Helix 11	AB2	A	220	223	Right-handed 310
Helix 12	AB3	A	254	256	Right-handed 310
Helix 13	AB4	A	283	298	Right-handed alpha
Helix 14	AB5	A	298	306	Right-handed alpha
Helix 15	AB6	A	324	338	Right-handed alpha
Helix 16	AB7	A	374	387	Right-handed alpha
Helix 17	AB8	A	391	397	Right-handed alpha
Helix 18	AB9	A	403	407	Right-handed 310
Helix 19	AC1	A	408	415	Right-handed alpha
Helix 20	AC2	A	428	436	Right-handed alpha
Helix 21	AC3	A	453	465	Right-handed alpha
Helix 22	AC4	A	480	484	Right-handed 310
Helix 23	AC5	A	517	536	Right-handed alpha
Helix 24	AC6	A	556	564	Right-handed alpha
Helix 25	AC7	A	578	582	Right-handed 310
Helix 26	AC8	A	584	588	Right-handed 310
Helix 27	AC9	A	589	591	Right-handed 310
Helix 28	AD1	B	28	41	Right-handed alpha
Helix 29	AD2	B	42	48	Right-handed alpha
Helix 30	AD3	B	81	87	Right-handed alpha
Helix 31	AD4	B	107	113	Right-handed alpha
Helix 32	AD5	B	129	141	Right-handed alpha
Helix 33	AD6	B	153	164	Right-handed alpha
Helix 34	AD7	B	189	193	Right-handed 310
Helix 35	AD8	B	214	218	Right-handed 310
Helix 36	AD9	B	220	223	Right-handed 310
Helix 37	AE1	B	283	298	Right-handed alpha
Helix 38	AE2	B	298	306	Right-handed alpha
Helix 39	AE3	B	323	338	Right-handed alpha
Helix 40	AE4	B	374	387	Right-handed alpha
Helix 41	AE5	B	392	397	Right-handed alpha
Helix 42	AE6	B	403	407	Right-handed 310
Helix 43	AE7	B	408	415	Right-handed alpha
Helix 44	AE8	B	428	436	Right-handed alpha
Helix 45	AE9	B	453	465	Right-handed alpha
Helix 46	AF1	B	480	484	Right-handed 310
Helix 47	AF2	B	516	536	Right-handed alpha
Helix 48	AF3	B	556	564	Right-handed alpha
Helix 49	AF4	B	578	582	Right-handed 310
Helix 50	AF5	B	584	588	Right-handed 310
Helix 51	AF6	B	589	591	Right-handed 310
Helix 52	AF7	C	28	41	Right-handed alpha
Helix 53	AF8	C	42	48	Right-handed alpha
Helix 54	AF9	C	81	87	Right-handed alpha
Helix 55	AG1	C	88	92	Right-handed 310
Helix 56	AG2	C	107	115	Right-handed alpha
Helix 57	AG3	C	129	141	Right-handed alpha
Helix 58	AG4	C	153	164	Right-handed alpha
Helix 59	AG5	C	189	193	Right-handed 310
Helix 60	AG6	C	214	218	Right-handed 310
Helix 61	AG7	C	220	223	Right-handed 310
Helix 62	AG8	C	283	298	Right-handed alpha
Helix 63	AG9	C	298	307	Right-handed alpha
Helix 64	AH1	C	324	338	Right-handed alpha
Helix 65	AH2	C	374	387	Right-handed alpha
Helix 66	AH3	C	391	397	Right-handed alpha
Helix 67	AH4	C	403	407	Right-handed 310
Helix 68	AH5	C	408	415	Right-handed alpha
Helix 69	AH6	C	428	436	Right-handed alpha
Helix 70	AH7	C	453	465	Right-handed alpha
Helix 71	AH8	C	480	484	Right-handed 310
Helix 72	AH9	C	516	536	Right-handed alpha
Helix 73	AI1	C	556	564	Right-handed alpha
Helix 74	AI2	C	578	582	Right-handed 310
Helix 75	AI3	C	584	588	Right-handed 310
Helix 76	AI4	C	589	591	Right-handed 310
Helix 77	AI5	D	28	41	Right-handed alpha
Helix 78	AI6	D	42	48	Right-handed alpha
Helix 79	AI7	D	81	87	Right-handed alpha
Helix 80	AI8	D	88	92	Right-handed 310
Helix 81	AI9	D	107	115	Right-handed alpha
Helix 82	AJ1	D	129	141	Right-handed alpha
Helix 83	AJ2	D	153	164	Right-handed alpha
Helix 84	AJ3	D	189	193	Right-handed 310
Helix 85	AJ4	D	197	208	Right-handed alpha
Helix 86	AJ5	D	214	218	Right-handed 310
Helix 87	AJ6	D	220	223	Right-handed 310
Helix 88	AJ7	D	283	298	Right-handed alpha
Helix 89	AJ8	D	298	306	Right-handed alpha
Helix 90	AJ9	D	323	338	Right-handed alpha
Helix 91	AK1	D	374	387	Right-handed alpha
Helix 92	AK2	D	392	397	Right-handed alpha
Helix 93	AK3	D	403	407	Right-handed 310
Helix 94	AK4	D	408	415	Right-handed alpha
Helix 95	AK5	D	428	436	Right-handed alpha
Helix 96	AK6	D	453	465	Right-handed alpha
Helix 97	AK7	D	480	484	Right-handed 310
Helix 98	AK8	D	516	536	Right-handed alpha
Helix 99	AK9	D	556	564	Right-handed alpha
Helix 100	AL1	D	578	582	Right-handed 310
Helix 101	AL2	D	584	588	Right-handed 310
Helix 102	AL3	D	589	591	Right-handed 310

There are 20 sheets in PDB entry 7FGX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	98	102	parallel
Strand 3	A	74	80	parallel
Strand 4	A	145	152	parallel
Strand 5	A	5	11	parallel
Strand 6	A	166	174	parallel
Strand 7	A	241	252	anti-parallel
Strand 8	A	236	238	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	98	102	parallel
Strand 3	A	74	80	parallel
Strand 4	A	145	152	parallel
Strand 5	A	5	11	parallel
Strand 6	A	166	174	parallel
Strand 7	A	241	252	anti-parallel
Strand 8	A	225	232	anti-parallel
Strand 9	A	319	320	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	182	183	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	349	360	anti-parallel
Strand 3	A	539	553	anti-parallel
Strand 4	A	502	513	parallel
Strand 5	A	490	497	anti-parallel
Strand 6	A	472	474	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	576	first strand
Strand 2	A	593	596	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	127	first strand
Strand 2	B	98	102	parallel
Strand 3	B	74	80	parallel
Strand 4	B	145	150	parallel
Strand 5	B	5	11	parallel
Strand 6	B	166	174	parallel
Strand 7	B	241	252	anti-parallel
Strand 8	B	236	238	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	127	first strand
Strand 2	B	98	102	parallel
Strand 3	B	74	80	parallel
Strand 4	B	145	150	parallel
Strand 5	B	5	11	parallel
Strand 6	B	166	174	parallel
Strand 7	B	241	252	anti-parallel
Strand 8	B	225	232	anti-parallel
Strand 9	B	319	320	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	18	first strand
Strand 2	B	182	183	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	349	360	anti-parallel
Strand 3	B	539	553	anti-parallel
Strand 4	B	502	513	parallel
Strand 5	B	490	497	anti-parallel
Strand 6	B	472	474	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	573	576	first strand
Strand 2	B	593	596	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	98	102	parallel
Strand 3	C	74	80	parallel
Strand 4	C	145	150	parallel
Strand 5	C	5	11	parallel
Strand 6	C	166	174	parallel
Strand 7	C	241	252	anti-parallel
Strand 8	C	236	238	anti-parallel

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There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	98	102	parallel
Strand 3	C	74	80	parallel
Strand 4	C	145	150	parallel
Strand 5	C	5	11	parallel
Strand 6	C	166	174	parallel
Strand 7	C	241	252	anti-parallel
Strand 8	C	225	232	anti-parallel
Strand 9	C	319	320	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	18	first strand
Strand 2	C	182	183	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	349	360	anti-parallel
Strand 3	C	539	553	anti-parallel
Strand 4	C	502	513	parallel
Strand 5	C	490	497	anti-parallel
Strand 6	C	472	474	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	573	576	first strand
Strand 2	C	593	596	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	98	102	parallel
Strand 3	D	74	80	parallel
Strand 4	D	145	152	parallel
Strand 5	D	5	11	parallel
Strand 6	D	166	174	parallel
Strand 7	D	241	252	anti-parallel
Strand 8	D	236	238	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	98	102	parallel
Strand 3	D	74	80	parallel
Strand 4	D	145	152	parallel
Strand 5	D	5	11	parallel
Strand 6	D	166	174	parallel
Strand 7	D	241	252	anti-parallel
Strand 8	D	225	232	anti-parallel
Strand 9	D	319	320	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	18	first strand
Strand 2	D	182	183	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	349	360	anti-parallel
Strand 3	D	539	553	anti-parallel
Strand 4	D	502	513	parallel
Strand 5	D	490	497	anti-parallel
Strand 6	D	472	474	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	576	first strand
Strand 2	D	593	596	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7FGX

Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGX