Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7FGY entry

There are 4 chains in PDB entry 7FGY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 2	MET 606
B	GLN 2	MET 606
C	GLN 2	MET 606
D	GLN 2	MET 606

There are 90 helices in PDB entry 7FGY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	41	Right-handed alpha
Helix 2	AA2	A	81	87	Right-handed alpha
Helix 3	AA3	A	107	115	Right-handed alpha
Helix 4	AA4	A	129	141	Right-handed alpha
Helix 5	AA5	A	153	164	Right-handed alpha
Helix 6	AA6	A	189	193	Right-handed 310
Helix 7	AA7	A	203	208	Right-handed alpha
Helix 8	AA8	A	220	223	Right-handed 310
Helix 9	AA9	A	254	256	Right-handed 310
Helix 10	AB1	A	283	298	Right-handed alpha
Helix 11	AB2	A	298	306	Right-handed alpha
Helix 12	AB3	A	324	338	Right-handed alpha
Helix 13	AB4	A	374	387	Right-handed alpha
Helix 14	AB5	A	391	397	Right-handed alpha
Helix 15	AB6	A	403	407	Right-handed 310
Helix 16	AB7	A	408	415	Right-handed alpha
Helix 17	AB8	A	428	436	Right-handed alpha
Helix 18	AB9	A	453	465	Right-handed alpha
Helix 19	AC1	A	480	484	Right-handed 310
Helix 20	AC2	A	517	536	Right-handed alpha
Helix 21	AC3	A	556	564	Right-handed alpha
Helix 22	AC4	A	578	582	Right-handed 310
Helix 23	AC5	A	589	591	Right-handed 310
Helix 24	AC6	B	28	41	Right-handed alpha
Helix 25	AC7	B	42	48	Right-handed 310
Helix 26	AC8	B	81	86	Right-handed alpha
Helix 27	AC9	B	107	115	Right-handed alpha
Helix 28	AD1	B	129	140	Right-handed alpha
Helix 29	AD2	B	153	164	Right-handed alpha
Helix 30	AD3	B	189	193	Right-handed 310
Helix 31	AD4	B	214	218	Right-handed 310
Helix 32	AD5	B	220	223	Right-handed 310
Helix 33	AD6	B	283	298	Right-handed alpha
Helix 34	AD7	B	298	308	Right-handed alpha
Helix 35	AD8	B	324	338	Right-handed alpha
Helix 36	AD9	B	374	388	Right-handed alpha
Helix 37	AE1	B	392	397	Right-handed alpha
Helix 38	AE2	B	403	407	Right-handed 310
Helix 39	AE3	B	408	415	Right-handed alpha
Helix 40	AE4	B	428	435	Right-handed alpha
Helix 41	AE5	B	453	465	Right-handed alpha
Helix 42	AE6	B	477	484	Right-handed 310
Helix 43	AE7	B	517	535	Right-handed alpha
Helix 44	AE8	B	556	564	Right-handed alpha
Helix 45	AE9	B	584	588	Right-handed 310
Helix 46	AF1	C	28	41	Right-handed alpha
Helix 47	AF2	C	42	47	Right-handed 310
Helix 48	AF3	C	81	87	Right-handed alpha
Helix 49	AF4	C	107	115	Right-handed alpha
Helix 50	AF5	C	129	140	Right-handed alpha
Helix 51	AF6	C	153	164	Right-handed alpha
Helix 52	AF7	C	189	193	Right-handed 310
Helix 53	AF8	C	214	218	Right-handed 310
Helix 54	AF9	C	220	222	Right-handed 310
Helix 55	AG1	C	283	298	Right-handed alpha
Helix 56	AG2	C	298	304	Right-handed alpha
Helix 57	AG3	C	324	338	Right-handed alpha
Helix 58	AG4	C	374	388	Right-handed alpha
Helix 59	AG5	C	392	397	Right-handed alpha
Helix 60	AG6	C	398	399	Right-handed 310
Helix 61	AG7	C	400	407	Right-handed 310
Helix 62	AG8	C	408	415	Right-handed alpha
Helix 63	AG9	C	428	435	Right-handed alpha
Helix 64	AH1	C	453	465	Right-handed alpha
Helix 65	AH2	C	480	484	Right-handed 310
Helix 66	AH3	C	517	536	Right-handed alpha
Helix 67	AH4	C	556	564	Right-handed alpha
Helix 68	AH5	C	589	591	Right-handed 310
Helix 69	AH6	D	28	41	Right-handed alpha
Helix 70	AH7	D	42	46	Right-handed 310
Helix 71	AH8	D	81	86	Right-handed alpha
Helix 72	AH9	D	107	115	Right-handed alpha
Helix 73	AI1	D	129	141	Right-handed alpha
Helix 74	AI2	D	153	164	Right-handed alpha
Helix 75	AI3	D	189	193	Right-handed 310
Helix 76	AI4	D	199	204	Right-handed alpha
Helix 77	AI5	D	214	218	Right-handed 310
Helix 78	AI6	D	283	298	Right-handed alpha
Helix 79	AI7	D	298	308	Right-handed alpha
Helix 80	AI8	D	324	338	Right-handed alpha
Helix 81	AI9	D	374	387	Right-handed alpha
Helix 82	AJ1	D	392	397	Right-handed alpha
Helix 83	AJ2	D	403	407	Right-handed 310
Helix 84	AJ3	D	408	415	Right-handed alpha
Helix 85	AJ4	D	428	436	Right-handed alpha
Helix 86	AJ5	D	453	465	Right-handed alpha
Helix 87	AJ6	D	480	484	Right-handed 310
Helix 88	AJ7	D	516	535	Right-handed alpha
Helix 89	AJ8	D	556	564	Right-handed alpha
Helix 90	AJ9	D	584	588	Right-handed 310

There are 20 sheets in PDB entry 7FGY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	98	102	parallel
Strand 3	A	74	80	parallel
Strand 4	A	145	152	parallel
Strand 5	A	5	11	parallel
Strand 6	A	166	174	parallel
Strand 7	A	241	252	anti-parallel
Strand 8	A	236	238	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	98	102	parallel
Strand 3	A	74	80	parallel
Strand 4	A	145	152	parallel
Strand 5	A	5	11	parallel
Strand 6	A	166	174	parallel
Strand 7	A	241	252	anti-parallel
Strand 8	A	225	232	anti-parallel
Strand 9	A	319	320	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	182	183	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	341	first strand
Strand 2	A	349	360	anti-parallel
Strand 3	A	539	553	anti-parallel
Strand 4	A	502	513	parallel
Strand 5	A	490	497	anti-parallel
Strand 6	A	472	474	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	576	first strand
Strand 2	A	593	596	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	127	first strand
Strand 2	B	98	102	parallel
Strand 3	B	74	80	parallel
Strand 4	B	145	152	parallel
Strand 5	B	5	11	parallel
Strand 6	B	168	174	parallel
Strand 7	B	241	252	anti-parallel
Strand 8	B	236	238	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	127	first strand
Strand 2	B	98	102	parallel
Strand 3	B	74	80	parallel
Strand 4	B	145	152	parallel
Strand 5	B	5	11	parallel
Strand 6	B	168	174	parallel
Strand 7	B	241	252	anti-parallel
Strand 8	B	225	232	anti-parallel
Strand 9	B	319	320	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	18	first strand
Strand 2	B	182	183	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	341	first strand
Strand 2	B	349	360	anti-parallel
Strand 3	B	539	553	anti-parallel
Strand 4	B	502	513	parallel
Strand 5	B	490	497	anti-parallel
Strand 6	B	472	474	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	573	576	first strand
Strand 2	B	593	596	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	98	102	parallel
Strand 3	C	74	80	parallel
Strand 4	C	145	152	parallel
Strand 5	C	5	11	parallel
Strand 6	C	168	174	parallel
Strand 7	C	241	252	anti-parallel
Strand 8	C	224	232	anti-parallel
Strand 9	C	236	238	first strand

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	212	first strand
Strand 2	C	224	232	anti-parallel
Strand 3	C	241	252	anti-parallel
Strand 4	C	319	320	first strand

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	18	first strand
Strand 2	C	182	183	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	341	first strand
Strand 2	C	349	360	anti-parallel
Strand 3	C	539	553	anti-parallel
Strand 4	C	502	513	parallel
Strand 5	C	490	497	anti-parallel
Strand 6	C	472	474	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	573	576	first strand
Strand 2	C	593	596	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	97	102	parallel
Strand 3	D	74	80	parallel
Strand 4	D	145	150	parallel
Strand 5	D	5	11	parallel
Strand 6	D	168	174	parallel
Strand 7	D	241	252	anti-parallel
Strand 8	D	225	232	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	125	127	first strand
Strand 2	D	97	102	parallel
Strand 3	D	74	80	parallel
Strand 4	D	145	150	parallel
Strand 5	D	5	11	parallel
Strand 6	D	168	174	parallel
Strand 7	D	241	252	anti-parallel
Strand 8	D	236	238	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	18	first strand
Strand 2	D	182	183	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	341	first strand
Strand 2	D	349	360	anti-parallel
Strand 3	D	539	553	anti-parallel
Strand 4	D	502	513	parallel
Strand 5	D	490	497	anti-parallel
Strand 6	D	472	474	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	576	first strand
Strand 2	D	593	596	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7FGY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7FGY