Analysis of interatomic Contacts of Structural Units in PDB entry:
7FI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FI7 entry

There are 3 chains in PDB entry 7FI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 93VAL 216
B
 ASN 84VAL 216
C
 MET 1SER 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7FI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
119 130Right-handed alpha
Helix 2
AA2
A
143 149Right-handed 310
Helix 3
AA3
B
89 91Right-handed 310
Helix 4
AA4
B
119 129Right-handed alpha
Helix 5
AA5
B
143 149Right-handed 310
Helix 6
AA6
C
60 80Right-handed alpha
Helix 7
AA7
C
133 149Right-handed alpha
Helix 8
AA8
C
154 175Right-handed alpha
Helix 9
AA9
C
225 229Right-handed 310
Helix 10
AB1
C
254 256Right-handed 310
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There are 10 sheets in PDB entry 7FI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
B
93 96anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 106first strand
Strand 2
A
109 118anti-parallel
Strand 3
A
207 213anti-parallel
Strand 4
A
133 134anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
153 159anti-parallel
Strand 3
A
189 193anti-parallel
Strand 4
A
197 201anti-parallel
Strand 5
A
180 183parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 105first strand
Strand 2
B
109 118anti-parallel
Strand 3
B
207 214anti-parallel
Strand 4
B
133 134anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 168first strand
Strand 2
B
153 159anti-parallel
Strand 3
B
189 193anti-parallel
Strand 4
B
197 201anti-parallel
Strand 5
B
180 183parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 19first strand
Strand 2
C
4 15anti-parallel
Strand 3
C
24 29anti-parallel
Strand 4
C
32 37anti-parallel
Strand 5
C
42 43anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 19first strand
Strand 2
C
4 15anti-parallel
Strand 3
C
88 99anti-parallel
Strand 4
C
105 113anti-parallel
Strand 5
C
116 122anti-parallel
Strand 6
C
127 129anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
186 195first strand
Strand 2
C
198 208anti-parallel
Strand 3
C
242 251anti-parallel
Strand 4
C
230 231anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
186 195first strand
Strand 2
C
198 208anti-parallel
Strand 3
C
242 251anti-parallel
Strand 4
C
235 236anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 223first strand
Strand 2
C
214 219anti-parallel
Strand 3
C
258 264anti-parallel
Strand 4
C
267 272anti-parallel
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