Analysis of interatomic Contacts of Structural Units in PDB entry:
7FI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FI9 entry

There are 3 chains in PDB entry 7FI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 93VAL 216
B
 SER 81VAL 216
C
 MET 0SER 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 7FI9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
119 130Right-handed alpha
Helix 2
AA2
A
143 149Right-handed 310
Helix 3
AA3
B
89 93Right-handed 310
Helix 4
AA4
B
119 130Right-handed alpha
Helix 5
AA5
B
143 149Right-handed 310
Helix 6
AA6
C
60 64Right-handed alpha
Helix 7
AA7
C
67 79Right-handed alpha
Helix 8
AA8
C
132 149Right-handed alpha
Helix 9
AA9
C
153 175Right-handed alpha
Helix 10
AB1
C
193 195Right-handed 310
Helix 11
AB2
C
224 228Right-handed 310
Helix 12
AB3
C
253 255Right-handed 310
Back to top of page

There are 10 sheets in PDB entry 7FI9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
B
94 96anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 106first strand
Strand 2
A
109 118anti-parallel
Strand 3
A
207 212anti-parallel
Strand 4
A
133 134anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 168first strand
Strand 2
A
153 160anti-parallel
Strand 3
A
189 193anti-parallel
Strand 4
A
197 201anti-parallel
Strand 5
A
180 183parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 105first strand
Strand 2
B
109 118anti-parallel
Strand 3
B
207 214anti-parallel
Strand 4
B
133 134anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 168first strand
Strand 2
B
153 160anti-parallel
Strand 3
B
189 193anti-parallel
Strand 4
B
197 201anti-parallel
Strand 5
B
180 183parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 18first strand
Strand 2
C
3 14anti-parallel
Strand 3
C
23 28anti-parallel
Strand 4
C
31 37anti-parallel
Strand 5
C
40 42anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 18first strand
Strand 2
C
3 14anti-parallel
Strand 3
C
87 98anti-parallel
Strand 4
C
104 112anti-parallel
Strand 5
C
115 121anti-parallel
Strand 6
C
126 128anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 191first strand
Strand 2
C
197 207anti-parallel
Strand 3
C
241 250anti-parallel
Strand 4
C
229 230anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 191first strand
Strand 2
C
197 207anti-parallel
Strand 3
C
241 250anti-parallel
Strand 4
C
234 235anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
221 222first strand
Strand 2
C
213 218anti-parallel
Strand 3
C
257 263anti-parallel
Strand 4
C
266 271anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il