Analysis of interatomic Contacts of Structural Units in PDB entry:
7FID

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7FID entry

There are 7 chains in PDB entry 7FID (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ARG 2	VAL 780
C	ARG 2	VAL 780
D	ARG 2	VAL 780
E	ARG 2	VAL 780
F	ARG 2	VAL 780
A	ARG 2	VAL 780
S	UNK 1	UNK 22

There are175 helices in PDB entry 7FID. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	27	29	Right-handed 310
Helix 2	AA2	B	30	38	Right-handed alpha
Helix 3	AA3	B	117	139	Right-handed alpha
Helix 4	AA4	B	148	153	Right-handed alpha
Helix 5	AA5	B	157	168	Right-handed alpha
Helix 6	AA6	B	172	181	Right-handed alpha
Helix 7	AA7	B	185	236	Right-handed alpha
Helix 8	AA8	B	242	254	Right-handed alpha
Helix 9	AA9	B	259	274	Right-handed alpha
Helix 10	AB1	B	282	296	Right-handed alpha
Helix 11	AB2	B	307	317	Right-handed alpha
Helix 12	AB3	B	322	339	Right-handed alpha
Helix 13	AB4	B	363	372	Right-handed alpha
Helix 14	AB5	B	386	390	Right-handed 310
Helix 15	AB6	B	403	412	Right-handed alpha
Helix 16	AB7	B	423	427	Right-handed 310
Helix 17	AB8	B	438	443	Right-handed alpha
Helix 18	AB9	B	478	483	Right-handed alpha
Helix 19	AC1	B	494	505	Right-handed alpha
Helix 20	AC2	B	505	513	Right-handed alpha
Helix 21	AC3	B	523	534	Right-handed alpha
Helix 22	AC4	B	540	561	Right-handed alpha
Helix 23	AC5	B	573	579	Right-handed alpha
Helix 24	AC6	B	630	645	Right-handed alpha
Helix 25	AC7	B	647	652	Right-handed alpha
Helix 26	AC8	B	679	693	Right-handed alpha
Helix 27	AC9	B	717	728	Right-handed alpha
Helix 28	AD1	B	738	746	Right-handed 310
Helix 29	AD2	B	747	752	Right-handed alpha
Helix 30	AD3	B	761	770	Right-handed alpha
Helix 31	AD4	C	27	37	Right-handed alpha
Helix 32	AD5	C	117	136	Right-handed alpha
Helix 33	AD6	C	137	143	Right-handed 310
Helix 34	AD7	C	147	154	Right-handed alpha
Helix 35	AD8	C	157	168	Right-handed alpha
Helix 36	AD9	C	172	182	Right-handed alpha
Helix 37	AE1	C	184	237	Right-handed alpha
Helix 38	AE2	C	243	256	Right-handed alpha
Helix 39	AE3	C	259	274	Right-handed alpha
Helix 40	AE4	C	280	296	Right-handed alpha
Helix 41	AE5	C	307	316	Right-handed alpha
Helix 42	AE6	C	322	340	Right-handed alpha
Helix 43	AE7	C	361	372	Right-handed alpha
Helix 44	AE8	C	386	390	Right-handed 310
Helix 45	AE9	C	403	412	Right-handed alpha
Helix 46	AF1	C	438	443	Right-handed alpha
Helix 47	AF2	C	447	450	Right-handed 310
Helix 48	AF3	C	478	483	Right-handed alpha
Helix 49	AF4	C	494	505	Right-handed alpha
Helix 50	AF5	C	505	514	Right-handed alpha
Helix 51	AF6	C	523	534	Right-handed alpha
Helix 52	AF7	C	542	561	Right-handed alpha
Helix 53	AF8	C	573	579	Right-handed alpha
Helix 54	AF9	C	630	646	Right-handed alpha
Helix 55	AG1	C	656	660	Right-handed alpha
Helix 56	AG2	C	679	692	Right-handed alpha
Helix 57	AG3	C	717	728	Right-handed alpha
Helix 58	AG4	C	738	746	Right-handed 310
Helix 59	AG5	C	747	754	Right-handed alpha
Helix 60	AG6	C	761	770	Right-handed alpha
Helix 61	AG7	D	27	40	Right-handed alpha
Helix 62	AG8	D	117	139	Right-handed alpha
Helix 63	AG9	D	140	143	Right-handed 310
Helix 64	AH1	D	145	149	Right-handed 310
Helix 65	AH2	D	157	169	Right-handed alpha
Helix 66	AH3	D	172	182	Right-handed alpha
Helix 67	AH4	D	184	239	Right-handed alpha
Helix 68	AH5	D	245	256	Right-handed alpha
Helix 69	AH6	D	259	276	Right-handed alpha
Helix 70	AH7	D	280	295	Right-handed alpha
Helix 71	AH8	D	307	316	Right-handed alpha
Helix 72	AH9	D	322	339	Right-handed alpha
Helix 73	AI1	D	361	372	Right-handed alpha
Helix 74	AI2	D	386	390	Right-handed 310
Helix 75	AI3	D	403	412	Right-handed alpha
Helix 76	AI4	D	423	427	Right-handed 310
Helix 77	AI5	D	434	440	Right-handed alpha
Helix 78	AI6	D	478	483	Right-handed alpha
Helix 79	AI7	D	494	505	Right-handed alpha
Helix 80	AI8	D	505	514	Right-handed alpha
Helix 81	AI9	D	523	535	Right-handed alpha
Helix 82	AJ1	D	540	561	Right-handed alpha
Helix 83	AJ2	D	574	579	Right-handed alpha
Helix 84	AJ3	D	630	646	Right-handed alpha
Helix 85	AJ4	D	647	652	Right-handed alpha
Helix 86	AJ5	D	656	660	Right-handed alpha
Helix 87	AJ6	D	679	693	Right-handed alpha
Helix 88	AJ7	D	717	728	Right-handed alpha
Helix 89	AJ8	D	738	745	Right-handed 310
Helix 90	AJ9	D	747	752	Right-handed alpha
Helix 91	AK1	D	761	770	Right-handed alpha
Helix 92	AK2	E	30	39	Right-handed alpha
Helix 93	AK3	E	117	137	Right-handed alpha
Helix 94	AK4	E	138	142	Right-handed 310
Helix 95	AK5	E	157	167	Right-handed alpha
Helix 96	AK6	E	172	181	Right-handed alpha
Helix 97	AK7	E	185	238	Right-handed alpha
Helix 98	AK8	E	247	251	Right-handed 310
Helix 99	AK9	E	259	271	Right-handed alpha
Helix 100	AL1	E	282	295	Right-handed alpha
Helix 101	AL2	E	307	319	Right-handed alpha
Helix 102	AL3	E	322	339	Right-handed alpha
Helix 103	AL4	E	361	372	Right-handed alpha
Helix 104	AL5	E	403	412	Right-handed alpha
Helix 105	AL6	E	435	444	Right-handed alpha
Helix 106	AL7	E	478	483	Right-handed alpha
Helix 107	AL8	E	494	505	Right-handed alpha
Helix 108	AL9	E	506	514	Right-handed alpha
Helix 109	AM1	E	523	535	Right-handed alpha
Helix 110	AM2	E	540	561	Right-handed alpha
Helix 111	AM3	E	573	579	Right-handed alpha
Helix 112	AM4	E	630	647	Right-handed alpha
Helix 113	AM5	E	647	652	Right-handed alpha
Helix 114	AM6	E	679	693	Right-handed alpha
Helix 115	AM7	E	717	728	Right-handed alpha
Helix 116	AM8	E	738	746	Right-handed 310
Helix 117	AM9	E	747	754	Right-handed alpha
Helix 118	AN1	E	761	770	Right-handed alpha
Helix 119	AN2	F	27	38	Right-handed alpha
Helix 120	AN3	F	119	136	Right-handed alpha
Helix 121	AN4	F	139	143	Right-handed 310
Helix 122	AN5	F	157	167	Right-handed alpha
Helix 123	AN6	F	172	181	Right-handed alpha
Helix 124	AN7	F	185	237	Right-handed alpha
Helix 125	AN8	F	246	254	Right-handed alpha
Helix 126	AN9	F	259	267	Right-handed alpha
Helix 127	AO1	F	284	294	Right-handed alpha
Helix 128	AO2	F	307	319	Right-handed alpha
Helix 129	AO3	F	322	339	Right-handed alpha
Helix 130	AO4	F	361	372	Right-handed alpha
Helix 131	AO5	F	386	390	Right-handed 310
Helix 132	AO6	F	403	412	Right-handed alpha
Helix 133	AO7	F	424	427	Right-handed 310
Helix 134	AO8	F	435	444	Right-handed alpha
Helix 135	AO9	F	447	451	Right-handed 310
Helix 136	AP1	F	478	483	Right-handed alpha
Helix 137	AP2	F	494	513	Right-handed alpha
Helix 138	AP3	F	523	535	Right-handed alpha
Helix 139	AP4	F	540	559	Right-handed alpha
Helix 140	AP5	F	573	578	Right-handed alpha
Helix 141	AP6	F	630	647	Right-handed alpha
Helix 142	AP7	F	676	678	Right-handed 310
Helix 143	AP8	F	679	693	Right-handed alpha
Helix 144	AP9	F	717	727	Right-handed alpha
Helix 145	AQ1	F	738	744	Right-handed 310
Helix 146	AQ2	F	747	752	Right-handed alpha
Helix 147	AQ3	F	761	770	Right-handed alpha
Helix 148	AQ4	A	30	37	Right-handed alpha
Helix 149	AQ5	A	38	40	Right-handed 310
Helix 150	AQ6	A	58	62	Right-handed 310
Helix 151	AQ7	A	117	136	Right-handed alpha
Helix 152	AQ8	A	157	168	Right-handed alpha
Helix 153	AQ9	A	172	182	Right-handed alpha
Helix 154	AR1	A	184	238	Right-handed alpha
Helix 155	AR2	A	244	256	Right-handed alpha
Helix 156	AR3	A	259	271	Right-handed alpha
Helix 157	AR4	A	282	294	Right-handed alpha
Helix 158	AR5	A	307	319	Right-handed alpha
Helix 159	AR6	A	322	339	Right-handed alpha
Helix 160	AR7	A	363	372	Right-handed alpha
Helix 161	AR8	A	403	412	Right-handed alpha
Helix 162	AR9	A	423	427	Right-handed 310
Helix 163	AS1	A	434	443	Right-handed alpha
Helix 164	AS2	A	447	451	Right-handed 310
Helix 165	AS3	A	478	483	Right-handed alpha
Helix 166	AS4	A	494	513	Right-handed alpha
Helix 167	AS5	A	523	535	Right-handed alpha
Helix 168	AS6	A	540	561	Right-handed alpha
Helix 169	AS7	A	573	579	Right-handed alpha
Helix 170	AS8	A	630	647	Right-handed alpha
Helix 171	AS9	A	656	659	Right-handed 310
Helix 172	AT1	A	679	693	Right-handed alpha
Helix 173	AT2	A	717	728	Right-handed alpha
Helix 174	AT3	A	738	743	Right-handed 310
Helix 175	AT4	A	761	770	Right-handed alpha

There are 42 sheets in PDB entry 7FID. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	9	first strand
Strand 2	B	43	47	parallel
Strand 3	B	66	70	anti-parallel
Strand 4	B	91	92	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	25	first strand
Strand 2	B	82	87	anti-parallel
Strand 3	B	74	76	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	B	104	106	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	380	first strand
Strand 2	B	418	422	parallel
Strand 3	B	466	471	parallel
Strand 4	B	350	354	parallel
Strand 5	B	486	489	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	522	first strand
Strand 2	B	567	569	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	596	602	first strand
Strand 2	B	607	618	anti-parallel
Strand 3	B	661	666	anti-parallel
Strand 4	B	622	626	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	702	first strand
Strand 2	B	733	736	parallel
Strand 3	B	756	759	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	705	706	first strand
Strand 2	B	712	713	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	8	first strand
Strand 2	C	45	46	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	23	first strand
Strand 2	C	84	93	anti-parallel
Strand 3	C	65	74	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	380	first strand
Strand 2	C	418	422	parallel
Strand 3	C	466	471	parallel
Strand 4	C	350	354	parallel
Strand 5	C	486	489	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	452	first strand
Strand 2	C	459	460	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	521	522	first strand
Strand 2	C	568	569	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	596	603	first strand
Strand 2	C	606	618	anti-parallel
Strand 3	C	661	666	anti-parallel
Strand 4	C	622	626	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	700	702	first strand
Strand 2	C	732	736	parallel
Strand 3	C	756	759	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	705	706	first strand
Strand 2	C	712	713	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	84	93	anti-parallel
Strand 3	D	63	74	anti-parallel
Strand 4	D	43	48	anti-parallel
Strand 5	D	5	9	parallel
Strand 6	D	104	105	anti-parallel
Strand 7	D	97	98	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	380	first strand
Strand 2	D	418	422	parallel
Strand 3	D	466	471	parallel
Strand 4	D	351	354	parallel
Strand 5	D	486	489	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	452	first strand
Strand 2	D	459	460	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	521	522	first strand
Strand 2	D	568	569	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	596	603	first strand
Strand 2	D	606	618	anti-parallel
Strand 3	D	661	666	anti-parallel
Strand 4	D	622	626	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	701	702	first strand
Strand 2	D	732	736	parallel
Strand 3	D	755	759	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	705	706	first strand
Strand 2	D	712	713	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	9	first strand
Strand 2	E	43	47	parallel
Strand 3	E	67	75	anti-parallel
Strand 4	E	83	87	anti-parallel
Strand 5	E	20	21	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	418	421	first strand
Strand 2	E	466	471	parallel
Strand 3	E	351	354	parallel
Strand 4	E	486	489	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	520	522	first strand
Strand 2	E	567	569	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	596	603	first strand
Strand 2	E	606	618	anti-parallel
Strand 3	E	661	666	anti-parallel
Strand 4	E	623	626	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	700	702	first strand
Strand 2	E	732	736	parallel
Strand 3	E	755	759	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	705	706	first strand
Strand 2	E	712	713	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	8	10	first strand
Strand 2	F	43	48	parallel
Strand 3	F	66	70	anti-parallel
Strand 4	F	88	92	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	25	first strand
Strand 2	F	82	86	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	376	380	first strand
Strand 2	F	418	422	parallel
Strand 3	F	466	471	parallel
Strand 4	F	350	354	parallel
Strand 5	F	485	489	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	520	522	first strand
Strand 2	F	567	569	parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	596	603	first strand
Strand 2	F	606	618	anti-parallel
Strand 3	F	661	666	anti-parallel
Strand 4	F	623	626	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	701	702	first strand
Strand 2	F	733	736	parallel
Strand 3	F	756	759	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	705	706	first strand
Strand 2	F	712	713	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	6	first strand
Strand 2	A	104	106	anti-parallel
Strand 3	A	96	97	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	25	first strand
Strand 2	A	82	93	anti-parallel
Strand 3	A	65	75	anti-parallel
Strand 4	A	43	46	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	379	first strand
Strand 2	A	418	421	parallel
Strand 3	A	466	471	parallel
Strand 4	A	351	354	parallel
Strand 5	A	486	489	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	522	first strand
Strand 2	A	567	569	parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	596	603	first strand
Strand 2	A	606	618	anti-parallel
Strand 3	A	661	666	anti-parallel
Strand 4	A	622	626	parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	702	first strand
Strand 2	A	733	736	parallel
Strand 3	A	756	759	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7FID

Analysis of interatomic Contacts of Structural Units in PDB entry:
7FID