Analysis of interatomic Contacts of Structural Units in PDB entry:
7FIV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FIV entry

There are 2 chains in PDB entry 7FIV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLU 427
B
 GLY 4ARG 758
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 53 helices in PDB entry 7FIV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
17 19Right-handed 310
Helix 3
AA3
A
23 39Right-handed alpha
Helix 4
AA4
A
45 50Right-handed alpha
Helix 5
AA5
A
54 65Right-handed alpha
Helix 6
AA6
A
66 68Right-handed 310
Helix 7
AA7
A
76 84Right-handed alpha
Helix 8
AA8
A
97 105Right-handed alpha
Helix 9
AA9
A
110 124Right-handed alpha
Helix 10
AB1
A
135 152Right-handed alpha
Helix 11
AB2
A
153 160Right-handed 310
Helix 12
AB3
A
173 184Right-handed alpha
Helix 13
AB4
A
186 197Right-handed alpha
Helix 14
AB5
A
200 214Right-handed alpha
Helix 15
AB6
A
221 231Right-handed alpha
Helix 16
AB7
A
235 246Right-handed alpha
Helix 17
AB8
A
248 260Right-handed alpha
Helix 18
AB9
A
262 272Right-handed alpha
Helix 19
AC1
A
290 308Right-handed alpha
Helix 20
AC2
A
311 324Right-handed alpha
Helix 21
AC3
A
325 327Right-handed 310
Helix 22
AC4
A
328 336Right-handed alpha
Helix 23
AC5
A
345 357Right-handed alpha
Helix 24
AC6
A
364 386Right-handed alpha
Helix 25
AC7
A
389 404Right-handed alpha
Helix 26
AC8
A
415 427Right-handed alpha
Helix 27
AC9
B
6 13Right-handed alpha
Helix 28
AD1
B
15 30Right-handed alpha
Helix 29
AD2
B
33 37Right-handed 310
Helix 30
AD3
B
41 53Right-handed alpha
Helix 31
AD4
B
117 129Right-handed alpha
Helix 32
AD5
B
182 193Right-handed alpha
Helix 33
AD6
B
199 206Right-handed alpha
Helix 34
AD7
B
209 220Right-handed alpha
Helix 35
AD8
B
243 254Right-handed alpha
Helix 36
AD9
B
254 266Right-handed alpha
Helix 37
AE1
B
266 272Right-handed alpha
Helix 38
AE2
B
278 293Right-handed alpha
Helix 39
AE3
B
337 351Right-handed alpha
Helix 40
AE4
B
351 356Right-handed alpha
Helix 41
AE5
B
357 362Right-handed alpha
Helix 42
AE6
B
394 402Right-handed alpha
Helix 43
AE7
B
407 419Right-handed alpha
Helix 44
AE8
B
427 429Right-handed 310
Helix 45
AE9
B
430 448Right-handed alpha
Helix 46
AF1
B
543 550Right-handed alpha
Helix 47
AF2
B
565 577Right-handed alpha
Helix 48
AF3
B
582 598Right-handed alpha
Helix 49
AF4
B
600 605Right-handed alpha
Helix 50
AF5
B
608 623Right-handed alpha
Helix 51
AF6
B
692 708Right-handed alpha
Helix 52
AF7
B
714 718Right-handed 310
Helix 53
AF8
B
736 739Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 7FIV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
74 75anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 89first strand
Strand 2
A
92 93anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 225first strand
Strand 2
B
64 72anti-parallel
Strand 3
B
86 94anti-parallel
Strand 4
B
99 106anti-parallel
Strand 5
B
141 150parallel
Strand 6
B
163 168anti-parallel
Strand 7
B
651 667anti-parallel
Strand 8
B
680 687anti-parallel
Strand 9
B
722 731parallel
Strand 10
B
741 742anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
628 644first strand
Strand 2
B
651 667anti-parallel
Strand 3
B
680 687anti-parallel
Strand 4
B
722 731parallel
Strand 5
B
753 755anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 305first strand
Strand 2
B
312 318anti-parallel
Strand 3
B
328 332anti-parallel
Strand 4
B
366 372parallel
Strand 5
B
381 387anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
453 454first strand
Strand 2
B
460 461anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
532 534first strand
Strand 2
B
518 526anti-parallel
Strand 3
B
538 542anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
532 534first strand
Strand 2
B
518 526anti-parallel
Strand 3
B
489 495parallel
Strand 4
B
477 484anti-parallel
Strand 5
B
463 470anti-parallel
Strand 6
B
557 561anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il