Analysis of interatomic Contacts of Structural Units in PDB entry:
7FJ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FJ2 entry

There are 8 chains in PDB entry 7FJ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 233HIS 311
B
 ARG 236HIS 311
C
 A 7 T 26
D
 A 7 T 26
E
 VAL 233HIS 311
F
 SER 232HIS 311
G
 A 7 T 26
H
 A 7 T 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7FJ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
240 251Right-handed alpha
Helix 2
AA2
A
258 270Right-handed alpha
Helix 3
AA3
A
270 276Right-handed alpha
Helix 4
AA4
A
280 292Right-handed alpha
Helix 5
AA5
B
240 251Right-handed alpha
Helix 6
AA6
B
258 270Right-handed alpha
Helix 7
AA7
B
271 276Right-handed alpha
Helix 8
AA8
B
280 292Right-handed alpha
Helix 9
AA9
E
240 251Right-handed alpha
Helix 10
AB1
E
258 270Right-handed alpha
Helix 11
AB2
E
271 276Right-handed alpha
Helix 12
AB3
E
280 292Right-handed alpha
Helix 13
AB4
F
240 251Right-handed alpha
Helix 14
AB5
F
258 270Right-handed alpha
Helix 15
AB6
F
270 276Right-handed alpha
Helix 16
AB7
F
280 292Right-handed alpha
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There are 4 sheets in PDB entry 7FJ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 257first strand
Strand 2
A
306 310anti-parallel
Strand 3
A
295 299anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
295 299first strand
Strand 2
B
306 310anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
256 257first strand
Strand 2
E
306 310anti-parallel
Strand 3
E
295 299anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
295 299first strand
Strand 2
F
306 310anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il