Analysis of interatomic Contacts of Structural Units in PDB entry:
7FJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FJ9 entry

There are 2 chains in PDB entry 7FJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLN 396
B
 THR 2PRO 395
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7FJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 75Right-handed alpha
Helix 2
AA2
A
80 84Right-handed 310
Helix 3
AA3
A
105 115Right-handed alpha
Helix 4
AA4
A
116 118Right-handed 310
Helix 5
AA5
A
122 137Right-handed alpha
Helix 6
AA6
A
148 154Right-handed 310
Helix 7
AA7
A
155 160Right-handed alpha
Helix 8
AA8
A
164 170Right-handed alpha
Helix 9
AA9
A
179 195Right-handed alpha
Helix 10
AB1
A
197 200Right-handed 310
Helix 11
AB2
A
247 257Right-handed alpha
Helix 12
AB3
A
259 270Right-handed alpha
Helix 13
AB4
A
271 278Right-handed alpha
Helix 14
AB5
A
282 292Right-handed alpha
Helix 15
AB6
A
294 320Right-handed alpha
Helix 16
AB7
A
329 335Right-handed alpha
Helix 17
AB8
A
335 344Right-handed alpha
Helix 18
AB9
A
346 350Right-handed 310
Helix 19
AC1
A
354 360Right-handed alpha
Helix 20
AC2
A
380 394Right-handed alpha
Helix 21
AC3
B
64 74Right-handed alpha
Helix 22
AC4
B
105 115Right-handed alpha
Helix 23
AC5
B
116 118Right-handed 310
Helix 24
AC6
B
122 136Right-handed alpha
Helix 25
AC7
B
148 154Right-handed 310
Helix 26
AC8
B
155 160Right-handed alpha
Helix 27
AC9
B
165 170Right-handed alpha
Helix 28
AD1
B
179 195Right-handed alpha
Helix 29
AD2
B
197 200Right-handed 310
Helix 30
AD3
B
247 257Right-handed alpha
Helix 31
AD4
B
259 270Right-handed alpha
Helix 32
AD5
B
271 278Right-handed alpha
Helix 33
AD6
B
282 292Right-handed alpha
Helix 34
AD7
B
294 320Right-handed alpha
Helix 35
AD8
B
329 333Right-handed alpha
Helix 36
AD9
B
335 344Right-handed alpha
Helix 37
AE1
B
346 350Right-handed 310
Helix 38
AE2
B
354 360Right-handed alpha
Helix 39
AE3
B
380 394Right-handed alpha
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There are 4 sheets in PDB entry 7FJ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
42 47anti-parallel
Strand 3
A
26 34anti-parallel
Strand 4
A
15 22anti-parallel
Strand 5
A
3 10anti-parallel
Strand 6
A
86 91parallel
Strand 7
A
142 146parallel
Strand 8
A
102 103anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 225first strand
Strand 2
A
212 218anti-parallel
Strand 3
A
202 208anti-parallel
Strand 4
A
324 328parallel
Strand 5
A
373 376parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 31first strand
Strand 2
B
16 22anti-parallel
Strand 3
B
3 9anti-parallel
Strand 4
B
86 91parallel
Strand 5
B
142 146parallel
Strand 6
B
102 103anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 225first strand
Strand 2
B
212 218anti-parallel
Strand 3
B
202 208anti-parallel
Strand 4
B
324 328parallel
Strand 5
B
373 376parallel
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