Analysis of interatomic Contacts of Structural Units in PDB entry:
7FJL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7FJL entry

There are 4 chains in PDB entry 7FJL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 428
B	MET 1	ARG 428
C	MET 1	LEU 423
D	MET 1	GLU 35

There are100 helices in PDB entry 7FJL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	12	Right-handed alpha
Helix 2	AA2	A	17	24	Right-handed alpha
Helix 3	AA3	A	33	37	Right-handed alpha
Helix 4	AA4	A	76	80	Right-handed 310
Helix 5	AA5	A	114	118	Right-handed 310
Helix 6	AA6	A	138	142	Right-handed 310
Helix 7	AA7	A	168	176	Right-handed alpha
Helix 8	AA8	A	177	184	Right-handed 310
Helix 9	AA9	A	291	299	Right-handed alpha
Helix 10	AB1	A	319	323	Right-handed 310
Helix 11	AB2	A	324	330	Right-handed alpha
Helix 12	AB3	A	338	350	Right-handed alpha
Helix 13	AB4	A	355	359	Right-handed 310
Helix 14	AB5	A	362	364	Right-handed 310
Helix 15	AB6	A	365	384	Right-handed alpha
Helix 16	AB7	A	391	395	Right-handed 310
Helix 17	AB8	A	412	416	Right-handed 310
Helix 18	AB9	B	3	12	Right-handed alpha
Helix 19	AC1	B	17	24	Right-handed alpha
Helix 20	AC2	B	33	37	Right-handed alpha
Helix 21	AC3	B	76	80	Right-handed 310
Helix 22	AC4	B	109	113	Right-handed 310
Helix 23	AC5	B	138	142	Right-handed 310
Helix 24	AC6	B	168	177	Right-handed alpha
Helix 25	AC7	B	178	184	Right-handed 310
Helix 26	AC8	B	291	300	Right-handed alpha
Helix 27	AC9	B	319	323	Right-handed 310
Helix 28	AD1	B	324	330	Right-handed alpha
Helix 29	AD2	B	338	350	Right-handed alpha
Helix 30	AD3	B	355	359	Right-handed 310
Helix 31	AD4	B	362	364	Right-handed 310
Helix 32	AD5	B	365	384	Right-handed alpha
Helix 33	AD6	B	391	395	Right-handed 310
Helix 34	AD7	B	412	416	Right-handed 310
Helix 35	AD8	C	3	12	Right-handed alpha
Helix 36	AD9	C	17	24	Right-handed alpha
Helix 37	AE1	C	33	37	Right-handed alpha
Helix 38	AE2	C	76	80	Right-handed 310
Helix 39	AE3	C	138	142	Right-handed 310
Helix 40	AE4	C	168	177	Right-handed alpha
Helix 41	AE5	C	178	184	Right-handed 310
Helix 42	AE6	C	285	289	Right-handed 310
Helix 43	AE7	C	291	300	Right-handed alpha
Helix 44	AE8	C	319	323	Right-handed 310
Helix 45	AE9	C	324	331	Right-handed alpha
Helix 46	AF1	C	338	350	Right-handed alpha
Helix 47	AF2	C	355	359	Right-handed 310
Helix 48	AF3	C	362	364	Right-handed 310
Helix 49	AF4	C	365	384	Right-handed alpha
Helix 50	AF5	C	391	395	Right-handed 310
Helix 51	AF6	D	3	12	Right-handed alpha
Helix 52	AF7	D	17	24	Right-handed alpha
Helix 53	AF8	D	33	37	Right-handed alpha
Helix 54	AF9	D	76	80	Right-handed 310
Helix 55	AG1	D	138	142	Right-handed 310
Helix 56	AG2	D	168	176	Right-handed alpha
Helix 57	AG3	D	177	184	Right-handed 310
Helix 58	AG4	D	291	300	Right-handed alpha
Helix 59	AG5	D	319	323	Right-handed 310
Helix 60	AG6	D	324	330	Right-handed alpha
Helix 61	AG7	D	338	350	Right-handed alpha
Helix 62	AG8	D	355	359	Right-handed 310
Helix 63	AG9	D	362	364	Right-handed 310
Helix 64	AH1	D	365	384	Right-handed alpha
Helix 65	AH2	D	391	395	Right-handed 310
Helix 66	AH3	D	412	416	Right-handed 310
Helix 67	AH4	E	3	12	Right-handed alpha
Helix 68	AH5	E	17	24	Right-handed alpha
Helix 69	AH6	E	33	37	Right-handed alpha
Helix 70	AH7	E	76	80	Right-handed 310
Helix 71	AH8	E	113	118	Right-handed alpha
Helix 72	AH9	E	138	142	Right-handed 310
Helix 73	AI1	E	168	177	Right-handed alpha
Helix 74	AI2	E	178	184	Right-handed 310
Helix 75	AI3	E	186	190	Right-handed 310
Helix 76	AI4	E	291	300	Right-handed alpha
Helix 77	AI5	E	316	323	Right-handed 310
Helix 78	AI6	E	324	330	Right-handed alpha
Helix 79	AI7	E	338	350	Right-handed alpha
Helix 80	AI8	E	355	359	Right-handed 310
Helix 81	AI9	E	362	364	Right-handed 310
Helix 82	AJ1	E	365	384	Right-handed alpha
Helix 83	AJ2	E	391	395	Right-handed 310
Helix 84	AJ3	F	3	12	Right-handed alpha
Helix 85	AJ4	F	17	24	Right-handed alpha
Helix 86	AJ5	F	33	37	Right-handed alpha
Helix 87	AJ6	F	76	80	Right-handed 310
Helix 88	AJ7	F	113	118	Right-handed alpha
Helix 89	AJ8	F	138	142	Right-handed 310
Helix 90	AJ9	F	168	176	Right-handed alpha
Helix 91	AK1	F	177	184	Right-handed 310
Helix 92	AK2	F	291	300	Right-handed alpha
Helix 93	AK3	F	319	323	Right-handed 310
Helix 94	AK4	F	324	330	Right-handed alpha
Helix 95	AK5	F	338	350	Right-handed alpha
Helix 96	AK6	F	355	359	Right-handed 310
Helix 97	AK7	F	362	364	Right-handed 310
Helix 98	AK8	F	365	384	Right-handed alpha
Helix 99	AK9	F	391	395	Right-handed 310
Helix 100	AL1	F	412	416	Right-handed 310

There are 30 sheets in PDB entry 7FJL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	131	134	anti-parallel
Strand 3	A	125	128	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	44	48	first strand
Strand 2	A	51	57	anti-parallel
Strand 3	A	63	67	anti-parallel
Strand 4	A	122	123	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	87	88	anti-parallel
Strand 3	A	95	96	anti-parallel
Strand 4	A	102	104	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	165	first strand
Strand 2	A	275	284	anti-parallel
Strand 3	A	263	272	anti-parallel
Strand 4	A	253	256	anti-parallel
Strand 5	A	240	249	anti-parallel
Strand 6	A	224	231	anti-parallel
Strand 7	A	215	221	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	165	first strand
Strand 2	A	275	284	anti-parallel
Strand 3	A	263	272	anti-parallel
Strand 4	A	253	256	anti-parallel
Strand 5	A	240	249	anti-parallel
Strand 6	A	403	408	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	131	134	anti-parallel
Strand 3	B	125	128	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	48	first strand
Strand 2	B	51	57	anti-parallel
Strand 3	B	63	67	anti-parallel
Strand 4	B	122	123	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	83	first strand
Strand 2	B	86	88	anti-parallel
Strand 3	B	94	96	anti-parallel
Strand 4	B	102	105	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	165	first strand
Strand 2	B	275	284	anti-parallel
Strand 3	B	263	272	anti-parallel
Strand 4	B	253	256	anti-parallel
Strand 5	B	240	249	anti-parallel
Strand 6	B	224	231	anti-parallel
Strand 7	B	215	220	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	165	first strand
Strand 2	B	275	284	anti-parallel
Strand 3	B	263	272	anti-parallel
Strand 4	B	253	256	anti-parallel
Strand 5	B	240	249	anti-parallel
Strand 6	B	403	408	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	32	first strand
Strand 2	C	131	134	anti-parallel
Strand 3	C	125	128	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	48	first strand
Strand 2	C	51	57	anti-parallel
Strand 3	C	63	67	anti-parallel
Strand 4	C	122	123	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	83	first strand
Strand 2	C	86	88	anti-parallel
Strand 3	C	95	96	anti-parallel
Strand 4	C	102	104	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	165	first strand
Strand 2	C	275	284	anti-parallel
Strand 3	C	263	272	anti-parallel
Strand 4	C	253	256	anti-parallel
Strand 5	C	240	249	anti-parallel
Strand 6	C	224	231	anti-parallel
Strand 7	C	215	220	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	165	first strand
Strand 2	C	275	284	anti-parallel
Strand 3	C	263	272	anti-parallel
Strand 4	C	253	256	anti-parallel
Strand 5	C	240	249	anti-parallel
Strand 6	C	403	408	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	32	first strand
Strand 2	D	131	134	anti-parallel
Strand 3	D	125	128	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	48	first strand
Strand 2	D	51	57	anti-parallel
Strand 3	D	63	67	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	83	first strand
Strand 2	D	86	88	anti-parallel
Strand 3	D	94	96	anti-parallel
Strand 4	D	102	105	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	165	first strand
Strand 2	D	275	284	anti-parallel
Strand 3	D	263	272	anti-parallel
Strand 4	D	253	256	anti-parallel
Strand 5	D	240	249	anti-parallel
Strand 6	D	224	231	anti-parallel
Strand 7	D	215	221	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	165	first strand
Strand 2	D	275	284	anti-parallel
Strand 3	D	263	272	anti-parallel
Strand 4	D	253	256	anti-parallel
Strand 5	D	240	249	anti-parallel
Strand 6	D	403	408	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	32	first strand
Strand 2	E	131	134	anti-parallel
Strand 3	E	125	128	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	48	first strand
Strand 2	E	51	57	anti-parallel
Strand 3	E	63	67	anti-parallel
Strand 4	E	122	123	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	82	first strand
Strand 2	E	87	88	anti-parallel
Strand 3	E	94	96	anti-parallel
Strand 4	E	102	105	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	157	165	first strand
Strand 2	E	275	284	anti-parallel
Strand 3	E	263	272	anti-parallel
Strand 4	E	253	256	anti-parallel
Strand 5	E	242	249	anti-parallel
Strand 6	E	224	231	anti-parallel
Strand 7	E	215	220	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	157	165	first strand
Strand 2	E	275	284	anti-parallel
Strand 3	E	263	272	anti-parallel
Strand 4	E	253	256	anti-parallel
Strand 5	E	242	249	anti-parallel
Strand 6	E	403	406	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	32	first strand
Strand 2	F	131	134	anti-parallel
Strand 3	F	125	128	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	48	first strand
Strand 2	F	51	57	anti-parallel
Strand 3	F	63	67	anti-parallel
Strand 4	F	122	123	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	81	83	first strand
Strand 2	F	86	88	anti-parallel
Strand 3	F	94	96	anti-parallel
Strand 4	F	102	105	anti-parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	157	165	first strand
Strand 2	F	275	284	anti-parallel
Strand 3	F	263	272	anti-parallel
Strand 4	F	253	256	anti-parallel
Strand 5	F	240	249	anti-parallel
Strand 6	F	224	231	anti-parallel
Strand 7	F	215	221	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	157	165	first strand
Strand 2	F	275	284	anti-parallel
Strand 3	F	263	272	anti-parallel
Strand 4	F	253	256	anti-parallel
Strand 5	F	240	249	anti-parallel
Strand 6	F	403	408	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7FJL

Analysis of interatomic Contacts of Structural Units in PDB entry:
7FJL