Analysis of interatomic Contacts of Structural Units in PDB entry:
7FJM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FJM entry

There is 1 chain in PDB entry 7FJM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 60PRO 1173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7FJM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
67 71Right-handed 310
Helix 2
AA2
A
118 124Right-handed alpha
Helix 3
AA3
A
193 200Right-handed alpha
Helix 4
AA4
A
205 216Right-handed alpha
Helix 5
AA5
A
227 237Right-handed alpha
Helix 6
AA6
A
241 252Right-handed alpha
Helix 7
AA7
A
258 266Right-handed alpha
Helix 8
AA8
A
269 289Right-handed alpha
Helix 9
AA9
A
308 312Right-handed 310
Helix 10
AB1
A
369 371Right-handed 310
Helix 11
AB2
A
405 410Right-handed alpha
Helix 12
AB3
A
426 447Right-handed alpha
Helix 13
AB4
A
448 451Right-handed 310
Helix 14
AB5
A
456 466Right-handed alpha
Helix 15
AB6
A
472 492Right-handed alpha
Helix 16
AB7
A
497 501Right-handed 310
Helix 17
AB8
A
656 662Right-handed alpha
Helix 18
AB9
A
672 682Right-handed alpha
Helix 19
AC1
A
732 741Right-handed alpha
Helix 20
AC2
A
753 762Right-handed alpha
Helix 21
AC3
A
826 837Right-handed alpha
Helix 22
AC4
A
838 840Right-handed 310
Helix 23
AC5
A
841 846Right-handed alpha
Helix 24
AC6
A
858 867Right-handed alpha
Helix 25
AC7
A
884 889Right-handed alpha
Helix 26
AC8
A
912 914Right-handed 310
Helix 27
AC9
A
915 926Right-handed alpha
Helix 28
AD1
A
928 950Right-handed alpha
Helix 29
AD2
A
959 977Right-handed alpha
Helix 30
AD3
A
978 981Right-handed 310
Helix 31
AD4
A
998 1024Right-handed alpha
Helix 32
AD5
A
1044 1066Right-handed alpha
Helix 33
AD6
A
1074 1077Right-handed 310
Helix 34
AD7
A
1078 1098Right-handed alpha
Helix 35
AD8
A
1104 1108Right-handed 310
Helix 36
AD9
A
1116 1121Right-handed alpha
Helix 37
AE1
A
1121 1139Right-handed alpha
Helix 38
AE2
A
1157 1169Right-handed alpha
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There are 6 sheets in PDB entry 7FJM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
392 395anti-parallel
Strand 3
A
331 335anti-parallel
Strand 4
A
373 374anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 354first strand
Strand 2
A
338 341anti-parallel
Strand 3
A
379 380anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 851first strand
Strand 2
A
745 749parallel
Strand 3
A
509 512parallel
Strand 4
A
873 877parallel
Strand 5
A
891 894parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 530first strand
Strand 2
A
717 725anti-parallel
Strand 3
A
686 694anti-parallel
Strand 4
A
650 655anti-parallel
Strand 5
A
637 642anti-parallel
Strand 6
A
622 628anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 564first strand
Strand 2
A
567 568anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
792 793first strand
Strand 2
A
772 775anti-parallel
Strand 3
A
821 824parallel
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