Analysis of interatomic Contacts of Structural Units in PDB entry:
7FTP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FTP entry

There is 1 chain in PDB entry 7FTP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 162GLU 521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7FTP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
162 177Right-handed alpha
Helix 2
AA2
A
179 198Right-handed alpha
Helix 3
AA3
A
212 216Right-handed 310
Helix 4
AA4
A
260 264Right-handed 310
Helix 5
AA5
A
272 289Right-handed alpha
Helix 6
AA6
A
331 335Right-handed 310
Helix 7
AA7
A
345 354Right-handed alpha
Helix 8
AA8
A
379 388Right-handed alpha
Helix 9
AA9
A
405 424Right-handed alpha
Helix 10
AB1
A
425 428Right-handed 310
Helix 11
AB2
A
434 449Right-handed alpha
Helix 12
AB3
A
451 455Right-handed 310
Helix 13
AB4
A
456 458Right-handed 310
Helix 14
AB5
A
459 478Right-handed alpha
Helix 15
AB6
A
497 513Right-handed alpha
Helix 16
AB7
A
514 515Right-handed 310
Helix 17
AB8
A
516 520Right-handed 310
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There are 3 sheets in PDB entry 7FTP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
225 233anti-parallel
Strand 3
A
316 326parallel
Strand 4
A
357 361anti-parallel
Strand 5
A
374 378anti-parallel
Strand 6
A
248 253anti-parallel
Strand 7
A
237 241anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
225 233anti-parallel
Strand 3
A
316 326parallel
Strand 4
A
308 312anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
270 271anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il