Analysis of interatomic Contacts of Structural Units in PDB entry:
7HTS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7HTS entry

There are 2 chains in PDB entry 7HTS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 75LYS 359
B
 GLY 75LYS 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7HTS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
91 95Right-handed 310
Helix 2
AA2
A
102 121Right-handed alpha
Helix 3
AA3
A
131 137Right-handed alpha
Helix 4
AA4
A
210 219Right-handed alpha
Helix 5
AA5
A
234 238Right-handed 310
Helix 6
AA6
A
257 261Right-handed 310
Helix 7
AA7
A
268 278Right-handed alpha
Helix 8
AA8
A
281 287Right-handed alpha
Helix 9
AA9
B
91 95Right-handed 310
Helix 10
AB1
B
102 121Right-handed alpha
Helix 11
AB2
B
131 137Right-handed alpha
Helix 12
AB3
B
210 219Right-handed alpha
Helix 13
AB4
B
257 261Right-handed 310
Helix 14
AB5
B
268 278Right-handed alpha
Helix 15
AB6
B
281 287Right-handed alpha
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There are 4 sheets in PDB entry 7HTS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
84 89anti-parallel
Strand 3
A
159 169anti-parallel
Strand 4
A
173 182anti-parallel
Strand 5
A
188 200anti-parallel
Strand 6
A
206 207anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
84 89anti-parallel
Strand 3
A
159 169anti-parallel
Strand 4
A
173 182anti-parallel
Strand 5
A
188 200anti-parallel
Strand 6
A
139 150anti-parallel
Strand 7
A
288 297anti-parallel
Strand 8
A
348 358anti-parallel
Strand 9
A
333 342anti-parallel
Strand 10
A
307 313anti-parallel
Strand 11
A
249 254anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 77first strand
Strand 2
B
84 89anti-parallel
Strand 3
B
159 169anti-parallel
Strand 4
B
173 182anti-parallel
Strand 5
B
188 200anti-parallel
Strand 6
B
206 207anti-parallel
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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 77first strand
Strand 2
B
84 89anti-parallel
Strand 3
B
159 169anti-parallel
Strand 4
B
173 182anti-parallel
Strand 5
B
188 200anti-parallel
Strand 6
B
139 150anti-parallel
Strand 7
B
288 297anti-parallel
Strand 8
B
348 358anti-parallel
Strand 9
B
334 342anti-parallel
Strand 10
B
307 313anti-parallel
Strand 11
B
249 254anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il