Analysis of interatomic Contacts of Structural Units in PDB entry:
7JG2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JG2 entry

There are 6 chains in PDB entry 7JG2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 237	TYR 467
B	CYS 237	SER 460
C	CYS 237	TYR 467
D	CYS 237	TYR 467
E	SER 2	GLU 548
J	GLU 3	ASP 137

There are 34 helices in PDB entry 7JG2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	306	313	Right-handed alpha
Helix 2	AA2	A	351	357	Right-handed alpha
Helix 3	AA3	A	386	388	Right-handed 310
Helix 4	AA4	A	416	421	Right-handed alpha
Helix 5	AA5	B	247	251	Right-handed 310
Helix 6	AA6	B	306	312	Right-handed alpha
Helix 7	AA7	B	323	325	Right-handed 310
Helix 8	AA8	B	350	355	Right-handed alpha
Helix 9	AA9	B	416	422	Right-handed alpha
Helix 10	AB1	B	434	438	Right-handed 310
Helix 11	AB2	C	293	295	Right-handed 310
Helix 12	AB3	C	305	312	Right-handed alpha
Helix 13	AB4	C	350	355	Right-handed alpha
Helix 14	AB5	C	386	388	Right-handed 310
Helix 15	AB6	C	416	422	Right-handed alpha
Helix 16	AB7	C	444	448	Right-handed 310
Helix 17	AB8	D	247	252	Right-handed alpha
Helix 18	AB9	D	306	313	Right-handed alpha
Helix 19	AC1	D	350	357	Right-handed alpha
Helix 20	AC2	D	386	390	Right-handed 310
Helix 21	AC3	D	416	422	Right-handed alpha
Helix 22	AC4	D	434	438	Right-handed 310
Helix 23	AC5	E	27	33	Right-handed alpha
Helix 24	AC6	E	137	141	Right-handed 310
Helix 25	AC7	E	166	170	Right-handed 310
Helix 26	AC8	E	193	197	Right-handed 310
Helix 27	AC9	E	242	246	Right-handed 310
Helix 28	AD1	E	271	275	Right-handed 310
Helix 29	AD2	E	297	301	Right-handed 310
Helix 30	AD3	E	355	359	Right-handed 310
Helix 31	AD4	E	413	417	Right-handed 310
Helix 32	AD5	E	469	473	Right-handed 310
Helix 33	AD6	E	519	523	Right-handed 310
Helix 34	AD7	J	64	68	Right-handed alpha

There are 39 sheets in PDB entry 7JG2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	259	266	anti-parallel
Strand 3	A	297	299	anti-parallel
Strand 4	A	290	291	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	259	266	anti-parallel
Strand 3	A	302	303	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	276	first strand
Strand 2	A	316	321	anti-parallel
Strand 3	A	329	332	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	347	first strand
Strand 2	A	359	367	anti-parallel
Strand 3	A	406	415	anti-parallel
Strand 4	A	390	392	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	347	first strand
Strand 2	A	359	367	anti-parallel
Strand 3	A	406	415	anti-parallel
Strand 4	A	396	397	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	379	first strand
Strand 2	A	425	430	anti-parallel
Strand 3	A	438	443	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	457	458	first strand
Strand 2	A	457	460	parallel
Strand 3	J	61	63	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	258	266	anti-parallel
Strand 3	B	297	304	anti-parallel
Strand 4	B	286	291	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	276	first strand
Strand 2	B	316	322	anti-parallel
Strand 3	B	326	332	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	345	347	first strand
Strand 2	B	359	365	anti-parallel
Strand 3	B	410	415	anti-parallel
Strand 4	B	391	392	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	379	first strand
Strand 2	B	426	430	anti-parallel
Strand 3	B	439	441	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	397	first strand
Strand 2	B	406	407	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	244	first strand
Strand 2	C	258	266	anti-parallel
Strand 3	C	296	304	anti-parallel
Strand 4	C	285	292	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	275	first strand
Strand 2	C	316	321	anti-parallel
Strand 3	C	328	332	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	347	first strand
Strand 2	C	359	366	anti-parallel
Strand 3	C	406	415	anti-parallel
Strand 4	C	390	391	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	347	first strand
Strand 2	C	359	366	anti-parallel
Strand 3	C	406	415	anti-parallel
Strand 4	C	396	397	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	379	first strand
Strand 2	C	426	430	anti-parallel
Strand 3	C	439	441	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	457	458	first strand
Strand 2	C	453	460	parallel
Strand 3	J	31	42	parallel
Strand 4	J	15	23	anti-parallel
Strand 5	J	5	10	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	244	first strand
Strand 2	D	259	266	anti-parallel
Strand 3	D	297	303	anti-parallel
Strand 4	D	285	286	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	244	first strand
Strand 2	D	259	266	anti-parallel
Strand 3	D	297	303	anti-parallel
Strand 4	D	290	291	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	273	276	first strand
Strand 2	D	318	322	anti-parallel
Strand 3	D	325	330	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	346	first strand
Strand 2	D	359	367	anti-parallel
Strand 3	D	406	408	anti-parallel
Strand 4	D	396	397	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	346	first strand
Strand 2	D	359	367	anti-parallel
Strand 3	D	411	415	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	383	384	first strand
Strand 2	D	375	380	anti-parallel
Strand 3	D	427	430	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	18	23	first strand
Strand 2	E	74	79	anti-parallel
Strand 3	E	65	69	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	51	first strand
Strand 2	E	35	40	anti-parallel
Strand 3	E	93	94	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	51	first strand
Strand 2	E	35	40	anti-parallel
Strand 3	E	88	90	anti-parallel
Strand 4	E	105	107	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	124	first strand
Strand 2	E	213	219	parallel
Strand 3	E	198	204	anti-parallel
Strand 4	E	145	150	anti-parallel
Strand 5	E	156	160	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	135	first strand
Strand 2	E	184	189	anti-parallel
Strand 3	E	173	176	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	225	230	first strand
Strand 2	E	321	328	parallel
Strand 3	E	302	306	anti-parallel
Strand 4	E	249	255	anti-parallel
Strand 5	E	260	265	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	225	230	first strand
Strand 2	E	321	328	parallel
Strand 3	E	302	306	anti-parallel
Strand 4	E	249	255	anti-parallel
Strand 5	E	308	309	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	235	239	first strand
Strand 2	E	289	293	anti-parallel
Strand 3	E	278	279	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	343	first strand
Strand 2	E	433	439	parallel
Strand 3	E	418	421	anti-parallel
Strand 4	E	366	367	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	353	first strand
Strand 2	E	404	410	anti-parallel
Strand 3	E	395	397	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	454	457	first strand
Strand 2	E	540	547	parallel
Strand 3	E	524	532	anti-parallel
Strand 4	E	476	482	anti-parallel
Strand 5	E	487	490	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	454	457	first strand
Strand 2	E	540	547	parallel
Strand 3	E	524	532	anti-parallel
Strand 4	E	535	536	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	462	467	first strand
Strand 2	E	510	515	anti-parallel
Strand 3	E	493	495	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	74	75	first strand
Strand 2	J	84	85	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	111	118	first strand
Strand 2	J	121	128	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JG2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JG2