Analysis of interatomic Contacts of Structural Units in PDB entry:
7JG9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JG9 entry

There are 20 chains in PDB entry 7JG9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 7	VAL 520
B	ALA 8	LYS 546
C	ALA 9	VAL 520
D	THR 8	LEU 471
E	THR 8	LEU 471
F	THR 8	LEU 471
G	THR 4	LEU 303
H	ASP 3	GLN 119
a	THR 31	GLU 246
b	PRO 27	VAL 164
d	MET 1	PRO 444
1	PRO 5	LEU 85
2	PRO 5	LEU 85
3	PRO 5	LEU 85
4	PRO 5	LEU 85
5	PRO 5	LEU 85
6	PRO 5	LEU 85
7	PRO 5	LEU 85
8	PRO 5	LEU 85
9	PRO 5	LEU 85

There are200 helices in PDB entry 7JG9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	22	Right-handed alpha
Helix 2	AA2	A	81	85	Right-handed 310
Helix 3	AA3	A	103	107	Right-handed 310
Helix 4	AA4	A	153	160	Right-handed alpha
Helix 5	AA5	A	177	189	Right-handed alpha
Helix 6	AA6	A	189	194	Right-handed alpha
Helix 7	AA7	A	212	226	Right-handed alpha
Helix 8	AA8	A	227	230	Right-handed 310
Helix 9	AA9	A	242	264	Right-handed alpha
Helix 10	AB1	A	273	288	Right-handed alpha
Helix 11	AB2	A	293	297	Right-handed 310
Helix 12	AB3	A	298	300	Right-handed 310
Helix 13	AB4	A	301	310	Right-handed alpha
Helix 14	AB5	A	316	320	Right-handed 310
Helix 15	AB6	A	339	349	Right-handed alpha
Helix 16	AB7	A	356	363	Right-handed alpha
Helix 17	AB8	A	383	390	Right-handed alpha
Helix 18	AB9	A	392	408	Right-handed alpha
Helix 19	AC1	A	414	432	Right-handed alpha
Helix 20	AC2	A	440	453	Right-handed alpha
Helix 21	AC3	A	454	459	Right-handed 310
Helix 22	AC4	A	463	478	Right-handed alpha
Helix 23	AC5	A	480	490	Right-handed alpha
Helix 24	AC6	A	493	510	Right-handed alpha
Helix 25	AC7	B	9	22	Right-handed alpha
Helix 26	AC8	B	81	85	Right-handed 310
Helix 27	AC9	B	103	107	Right-handed 310
Helix 28	AD1	B	153	158	Right-handed alpha
Helix 29	AD2	B	177	189	Right-handed alpha
Helix 30	AD3	B	189	194	Right-handed alpha
Helix 31	AD4	B	212	226	Right-handed alpha
Helix 32	AD5	B	227	230	Right-handed 310
Helix 33	AD6	B	242	263	Right-handed alpha
Helix 34	AD7	B	273	288	Right-handed alpha
Helix 35	AD8	B	293	297	Right-handed 310
Helix 36	AD9	B	298	299	Right-handed 310
Helix 37	AE1	B	300	310	Right-handed alpha
Helix 38	AE2	B	316	320	Right-handed 310
Helix 39	AE3	B	339	349	Right-handed alpha
Helix 40	AE4	B	356	362	Right-handed alpha
Helix 41	AE5	B	377	381	Right-handed 310
Helix 42	AE6	B	383	391	Right-handed alpha
Helix 43	AE7	B	392	407	Right-handed alpha
Helix 44	AE8	B	414	432	Right-handed alpha
Helix 45	AE9	B	440	453	Right-handed alpha
Helix 46	AF1	B	454	459	Right-handed 310
Helix 47	AF2	B	460	462	Right-handed 310
Helix 48	AF3	B	463	479	Right-handed alpha
Helix 49	AF4	B	479	490	Right-handed alpha
Helix 50	AF5	B	493	511	Right-handed alpha
Helix 51	AF6	C	10	22	Right-handed alpha
Helix 52	AF7	C	81	85	Right-handed 310
Helix 53	AF8	C	103	107	Right-handed 310
Helix 54	AF9	C	153	158	Right-handed alpha
Helix 55	AG1	C	177	189	Right-handed alpha
Helix 56	AG2	C	189	194	Right-handed alpha
Helix 57	AG3	C	212	226	Right-handed alpha
Helix 58	AG4	C	227	230	Right-handed 310
Helix 59	AG5	C	242	263	Right-handed alpha
Helix 60	AG6	C	273	288	Right-handed alpha
Helix 61	AG7	C	293	297	Right-handed 310
Helix 62	AG8	C	298	299	Right-handed 310
Helix 63	AG9	C	300	310	Right-handed alpha
Helix 64	AH1	C	316	320	Right-handed 310
Helix 65	AH2	C	339	349	Right-handed alpha
Helix 66	AH3	C	356	362	Right-handed alpha
Helix 67	AH4	C	377	382	Right-handed 310
Helix 68	AH5	C	383	391	Right-handed alpha
Helix 69	AH6	C	392	404	Right-handed alpha
Helix 70	AH7	C	405	410	Right-handed 310
Helix 71	AH8	C	414	432	Right-handed alpha
Helix 72	AH9	C	440	453	Right-handed alpha
Helix 73	AI1	C	460	462	Right-handed 310
Helix 74	AI2	C	463	479	Right-handed alpha
Helix 75	AI3	C	479	490	Right-handed alpha
Helix 76	AI4	C	493	511	Right-handed alpha
Helix 77	AI5	D	42	46	Right-handed 310
Helix 78	AI6	D	91	95	Right-handed 310
Helix 79	AI7	D	126	130	Right-handed 310
Helix 80	AI8	D	141	148	Right-handed alpha
Helix 81	AI9	D	165	177	Right-handed alpha
Helix 82	AJ1	D	193	207	Right-handed alpha
Helix 83	AJ2	D	208	211	Right-handed 310
Helix 84	AJ3	D	223	244	Right-handed alpha
Helix 85	AJ4	D	256	271	Right-handed alpha
Helix 86	AJ5	D	275	279	Right-handed 310
Helix 87	AJ6	D	282	292	Right-handed alpha
Helix 88	AJ7	D	311	314	Right-handed 310
Helix 89	AJ8	D	317	324	Right-handed alpha
Helix 90	AJ9	D	325	327	Right-handed 310
Helix 91	AK1	D	334	340	Right-handed alpha
Helix 92	AK2	D	357	362	Right-handed alpha
Helix 93	AK3	D	362	390	Right-handed alpha
Helix 94	AK4	D	395	412	Right-handed alpha
Helix 95	AK5	D	416	418	Right-handed 310
Helix 96	AK6	D	419	424	Right-handed alpha
Helix 97	AK7	D	431	444	Right-handed alpha
Helix 98	AK8	D	451	455	Right-handed 310
Helix 99	AK9	D	460	471	Right-handed alpha
Helix 100	AL1	E	42	46	Right-handed 310
Helix 101	AL2	E	91	95	Right-handed 310
Helix 102	AL3	E	110	115	Right-handed 310
Helix 103	AL4	E	126	130	Right-handed 310
Helix 104	AL5	E	141	148	Right-handed alpha
Helix 105	AL6	E	165	178	Right-handed alpha
Helix 106	AL7	E	193	207	Right-handed alpha
Helix 107	AL8	E	209	211	Right-handed 310
Helix 108	AL9	E	223	244	Right-handed alpha
Helix 109	AM1	E	256	268	Right-handed alpha
Helix 110	AM2	E	275	279	Right-handed 310
Helix 111	AM3	E	282	295	Right-handed alpha
Helix 112	AM4	E	311	314	Right-handed 310
Helix 113	AM5	E	317	324	Right-handed alpha
Helix 114	AM6	E	325	327	Right-handed 310
Helix 115	AM7	E	334	340	Right-handed alpha
Helix 116	AM8	E	362	387	Right-handed alpha
Helix 117	AM9	E	390	394	Right-handed 310
Helix 118	AN1	E	395	412	Right-handed alpha
Helix 119	AN2	E	416	418	Right-handed 310
Helix 120	AN3	E	419	424	Right-handed alpha
Helix 121	AN4	E	431	444	Right-handed alpha
Helix 122	AN5	E	451	456	Right-handed 310
Helix 123	AN6	E	459	471	Right-handed alpha
Helix 124	AN7	F	42	46	Right-handed 310
Helix 125	AN8	F	91	95	Right-handed 310
Helix 126	AN9	F	126	130	Right-handed 310
Helix 127	AO1	F	141	148	Right-handed alpha
Helix 128	AO2	F	165	180	Right-handed alpha
Helix 129	AO3	F	193	207	Right-handed alpha
Helix 130	AO4	F	209	211	Right-handed 310
Helix 131	AO5	F	223	244	Right-handed alpha
Helix 132	AO6	F	255	270	Right-handed alpha
Helix 133	AO7	F	282	292	Right-handed alpha
Helix 134	AO8	F	310	314	Right-handed 310
Helix 135	AO9	F	317	325	Right-handed alpha
Helix 136	AP1	F	334	339	Right-handed alpha
Helix 137	AP2	F	362	390	Right-handed alpha
Helix 138	AP3	F	391	394	Right-handed 310
Helix 139	AP4	F	395	412	Right-handed alpha
Helix 140	AP5	F	419	424	Right-handed alpha
Helix 141	AP6	F	431	444	Right-handed alpha
Helix 142	AP7	F	451	455	Right-handed 310
Helix 143	AP8	F	460	471	Right-handed alpha
Helix 144	AP9	G	5	61	Right-handed alpha
Helix 145	AQ1	G	65	69	Right-handed 310
Helix 146	AQ2	G	91	111	Right-handed alpha
Helix 147	AQ3	G	120	130	Right-handed alpha
Helix 148	AQ4	G	146	163	Right-handed alpha
Helix 149	AQ5	G	227	303	Right-handed alpha
Helix 150	AQ6	H	91	100	Right-handed alpha
Helix 151	AQ7	H	103	117	Right-handed alpha
Helix 152	AQ8	a	32	53	Right-handed alpha
Helix 153	AQ9	a	60	81	Right-handed alpha
Helix 154	AR1	a	88	109	Right-handed alpha
Helix 155	AR2	a	126	129	Right-handed 310
Helix 156	AR3	a	130	154	Right-handed alpha
Helix 157	AR4	a	157	165	Right-handed alpha
Helix 158	AR5	a	167	169	Right-handed 310
Helix 159	AR6	a	170	204	Right-handed alpha
Helix 160	AR7	a	207	246	Right-handed alpha
Helix 161	AR8	b	29	49	Right-handed alpha
Helix 162	AR9	b	49	161	Right-handed alpha
Helix 163	AS1	d	2	22	Right-handed alpha
Helix 164	AS2	d	22	138	Right-handed alpha
Helix 165	AS3	d	139	157	Right-handed alpha
Helix 166	AS4	d	173	192	Right-handed alpha
Helix 167	AS5	d	195	216	Right-handed alpha
Helix 168	AS6	d	216	224	Right-handed alpha
Helix 169	AS7	d	230	242	Right-handed alpha
Helix 170	AS8	d	246	259	Right-handed alpha
Helix 171	AS9	d	264	287	Right-handed alpha
Helix 172	AT1	d	288	306	Right-handed alpha
Helix 173	AT2	d	306	314	Right-handed alpha
Helix 174	AT3	d	319	331	Right-handed alpha
Helix 175	AT4	d	338	351	Right-handed alpha
Helix 176	AT5	d	356	371	Right-handed alpha
Helix 177	AT6	d	386	402	Right-handed alpha
Helix 178	AT7	d	412	416	Right-handed 310
Helix 179	AT8	d	432	442	Right-handed alpha
Helix 180	AT9	1	6	45	Right-handed alpha
Helix 181	AU1	1	46	48	Right-handed 310
Helix 182	AU2	1	49	82	Right-handed alpha
Helix 183	AU3	2	6	44	Right-handed alpha
Helix 184	AU4	2	48	80	Right-handed alpha
Helix 185	AU5	3	6	46	Right-handed alpha
Helix 186	AU6	3	47	51	Right-handed 310
Helix 187	AU7	3	53	82	Right-handed alpha
Helix 188	AU8	4	6	46	Right-handed alpha
Helix 189	AU9	4	49	82	Right-handed alpha
Helix 190	AV1	5	6	46	Right-handed alpha
Helix 191	AV2	5	49	81	Right-handed alpha
Helix 192	AV3	6	6	46	Right-handed alpha
Helix 193	AV4	6	49	81	Right-handed alpha
Helix 194	AV5	7	6	46	Right-handed alpha
Helix 195	AV6	7	48	82	Right-handed alpha
Helix 196	AV7	8	6	45	Right-handed alpha
Helix 197	AV8	8	46	48	Right-handed 310
Helix 198	AV9	8	49	81	Right-handed alpha
Helix 199	AW1	9	6	46	Right-handed alpha
Helix 200	AW2	9	49	80	Right-handed alpha

There are 24 sheets in PDB entry 7JG9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	405	409	first strand
Strand 2	d	375	380	parallel
Strand 3	d	418	423	anti-parallel
Strand 4	d	426	431	anti-parallel
Strand 5	A	29	38	anti-parallel
Strand 6	A	90	92	anti-parallel
Strand 7	A	55	57	anti-parallel
Strand 8	A	63	69	anti-parallel
Strand 9	A	74	79	anti-parallel
Strand 10	A	41	45	anti-parallel

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There are 24 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	79	first strand
Strand 2	A	63	69	anti-parallel
Strand 3	D	10	16	anti-parallel
Strand 4	D	19	23	anti-parallel
Strand 5	D	61	66	anti-parallel
Strand 6	D	47	58	anti-parallel
Strand 7	B	31	38	anti-parallel
Strand 8	B	41	45	anti-parallel
Strand 9	B	73	79	anti-parallel
Strand 10	B	63	69	anti-parallel
Strand 11	E	10	16	anti-parallel
Strand 12	E	19	23	anti-parallel
Strand 13	E	61	66	anti-parallel
Strand 14	E	47	58	anti-parallel
Strand 15	C	31	38	anti-parallel
Strand 16	C	41	46	anti-parallel
Strand 17	C	74	77	anti-parallel
Strand 18	C	68	69	anti-parallel
Strand 19	F	10	16	anti-parallel
Strand 20	F	19	23	anti-parallel
Strand 21	F	61	66	anti-parallel
Strand 22	F	47	58	anti-parallel
Strand 23	A	29	38	anti-parallel
Strand 24	A	41	45	anti-parallel

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There are 24 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	55	57	anti-parallel
Strand 3	A	63	69	anti-parallel
Strand 4	D	10	16	anti-parallel
Strand 5	D	78	85	anti-parallel
Strand 6	D	34	40	anti-parallel
Strand 7	D	47	58	anti-parallel
Strand 8	B	31	38	anti-parallel
Strand 9	B	90	97	anti-parallel
Strand 10	B	54	57	anti-parallel
Strand 11	B	63	69	anti-parallel
Strand 12	E	10	16	anti-parallel
Strand 13	E	78	85	anti-parallel
Strand 14	E	34	40	anti-parallel
Strand 15	E	47	58	anti-parallel
Strand 16	C	31	38	anti-parallel
Strand 17	C	41	46	anti-parallel
Strand 18	C	74	77	anti-parallel
Strand 19	C	68	69	anti-parallel
Strand 20	F	10	16	anti-parallel
Strand 21	F	78	85	anti-parallel
Strand 22	F	34	40	anti-parallel
Strand 23	F	47	58	anti-parallel
Strand 24	A	29	38	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	64	first strand
Strand 2	C	54	58	anti-parallel
Strand 3	C	90	97	anti-parallel
Strand 4	C	31	38	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	102	first strand
Strand 2	A	128	131	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	A	232	237	parallel
Strand 3	A	202	209	parallel
Strand 4	A	266	272	parallel
Strand 5	A	323	331	parallel
Strand 6	A	170	172	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	352	first strand
Strand 2	A	374	375	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	102	first strand
Strand 2	B	128	131	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	232	237	parallel
Strand 3	B	202	209	parallel
Strand 4	B	266	272	parallel
Strand 5	B	323	328	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	351	352	first strand
Strand 2	B	374	375	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	540	first strand
Strand 2	G	195	210	parallel
Strand 3	G	182	192	anti-parallel
Strand 4	G	76	82	parallel
Strand 5	G	113	119	parallel
Strand 6	G	134	138	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	99	102	first strand
Strand 2	C	128	131	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	C	232	237	parallel
Strand 3	C	202	209	parallel
Strand 4	C	266	272	parallel
Strand 5	C	323	328	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	169	first strand
Strand 2	C	351	352	parallel
Strand 3	C	374	375	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	89	first strand
Strand 2	D	117	119	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	99	first strand
Strand 2	D	213	218	parallel
Strand 3	D	184	190	parallel
Strand 4	D	249	254	parallel
Strand 5	D	302	309	parallel
Strand 6	D	155	160	parallel
Strand 7	D	329	332	parallel
Strand 8	D	352	353	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	90	first strand
Strand 2	E	116	119	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	99	first strand
Strand 2	E	213	218	parallel
Strand 3	E	184	190	parallel
Strand 4	E	249	254	parallel
Strand 5	E	302	309	parallel
Strand 6	E	155	160	parallel
Strand 7	E	329	332	parallel
Strand 8	E	352	353	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	137	first strand
Strand 2	E	150	151	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	87	90	first strand
Strand 2	F	116	119	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	98	100	first strand
Strand 2	F	213	219	parallel
Strand 3	F	184	192	parallel
Strand 4	F	249	254	parallel
Strand 5	F	302	307	parallel
Strand 6	F	155	159	parallel
Strand 7	F	329	332	parallel
Strand 8	F	352	353	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	137	first strand
Strand 2	F	150	151	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	223	225	first strand
Strand 2	H	41	44	parallel
Strand 3	H	69	73	anti-parallel
Strand 4	H	76	81	anti-parallel
Strand 5	H	4	10	parallel
Strand 6	H	13	20	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	34	first strand
Strand 2	H	22	27	anti-parallel
Strand 3	H	49	55	anti-parallel
Strand 4	H	58	66	anti-parallel
Strand 5	H	83	86	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JG9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JG9