Analysis of interatomic Contacts of Structural Units in PDB entry:
7JGE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JGE entry

There is 1 chain in PDB entry 7JGE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 28LYS 1949
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 49 helices in PDB entry 7JGE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 105Right-handed 310
Helix 2
AA2
A
120 143Right-handed alpha
Helix 3
AA3
A
152 166Right-handed alpha
Helix 4
AA4
A
176 191Right-handed alpha
Helix 5
AA5
A
208 222Right-handed alpha
Helix 6
AA6
A
223 229Right-handed 310
Helix 7
AA7
A
274 305Right-handed alpha
Helix 8
AA8
A
318 355Right-handed alpha
Helix 9
AA9
A
364 379Right-handed alpha
Helix 10
AB1
A
581 586Right-handed alpha
Helix 11
AB2
A
587 591Right-handed 310
Helix 12
AB3
A
617 636Right-handed alpha
Helix 13
AB4
A
642 661Right-handed alpha
Helix 14
AB5
A
670 686Right-handed alpha
Helix 15
AB6
A
703 722Right-handed alpha
Helix 16
AB7
A
757 785Right-handed alpha
Helix 17
AB8
A
803 815Right-handed alpha
Helix 18
AB9
A
830 852Right-handed alpha
Helix 19
AC1
A
881 893Right-handed alpha
Helix 20
AC2
A
896 905Right-handed alpha
Helix 21
AC3
A
970 977Right-handed alpha
Helix 22
AC4
A
1028 1052Right-handed alpha
Helix 23
AC5
A
1093 1128Right-handed alpha
Helix 24
AC6
A
1140 1158Right-handed alpha
Helix 25
AC7
A
1171 1180Right-handed alpha
Helix 26
AC8
A
1186 1206Right-handed alpha
Helix 27
AC9
A
1266 1271Right-handed alpha
Helix 28
AD1
A
1296 1318Right-handed alpha
Helix 29
AD2
A
1342 1360Right-handed alpha
Helix 30
AD3
A
1366 1380Right-handed alpha
Helix 31
AD4
A
1403 1428Right-handed alpha
Helix 32
AD5
A
1449 1476Right-handed alpha
Helix 33
AD6
A
1500 1530Right-handed alpha
Helix 34
AD7
A
1534 1542Right-handed alpha
Helix 35
AD8
A
1550 1555Right-handed alpha
Helix 36
AD9
A
1570 1575Right-handed alpha
Helix 37
AE1
A
1626 1631Right-handed 310
Helix 38
AE2
A
1635 1643Right-handed alpha
Helix 39
AE3
A
1646 1674Right-handed alpha
Helix 40
AE4
A
1675 1678Right-handed 310
Helix 41
AE5
A
1680 1704Right-handed alpha
Helix 42
AE6
A
1710 1724Right-handed alpha
Helix 43
AE7
A
1730 1744Right-handed alpha
Helix 44
AE8
A
1755 1773Right-handed alpha
Helix 45
AE9
A
1793 1821Right-handed alpha
Helix 46
AF1
A
1837 1866Right-handed alpha
Helix 47
AF2
A
1887 1893Right-handed alpha
Helix 48
AF3
A
1915 1921Right-handed alpha
Helix 49
AF4
A
1929 1949Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7JGE.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
920 923first strand
Strand 2
A
947 950anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il