Analysis of interatomic Contacts of Structural Units in PDB entry:
7JGF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JGF entry

There is 1 chain in PDB entry 7JGF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2021LYS 2602
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7JGF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2023 2032Right-handed alpha
Helix 2
AA2
A
2060 2086Right-handed alpha
Helix 3
AA3
A
2088 2110Right-handed alpha
Helix 4
AA4
A
2117 2130Right-handed alpha
Helix 5
AA5
A
2135 2157Right-handed alpha
Helix 6
AA6
A
2183 2207Right-handed alpha
Helix 7
AA7
A
2221 2252Right-handed alpha
Helix 8
AA8
A
2294 2300Right-handed alpha
Helix 9
AA9
A
2302 2310Right-handed 310
Helix 10
AB1
A
2328 2337Right-handed alpha
Helix 11
AB2
A
2367 2372Right-handed alpha
Helix 12
AB3
A
2378 2380Right-handed 310
Helix 13
AB4
A
2381 2388Right-handed alpha
Helix 14
AB5
A
2388 2411Right-handed alpha
Helix 15
AB6
A
2414 2433Right-handed alpha
Helix 16
AB7
A
2441 2451Right-handed alpha
Helix 17
AB8
A
2458 2484Right-handed alpha
Helix 18
AB9
A
2496 2501Right-handed 310
Helix 19
AC1
A
2502 2513Right-handed alpha
Helix 20
AC2
A
2515 2529Right-handed alpha
Helix 21
AC3
A
2546 2548Right-handed 310
Helix 22
AC4
A
2549 2574Right-handed alpha
Helix 23
AC5
A
2583 2591Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7JGF.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2166 2167first strand
Strand 2
A
2170 2171anti-parallel
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