Analysis of interatomic Contacts of Structural Units in PDB entry:
7JGV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JGV entry

There are 2 chains in PDB entry 7JGV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 196
B
 MET 1ASN 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7JGV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 19Right-handed alpha
Helix 2
AA2
A
83 100Right-handed alpha
Helix 3
AA3
A
101 105Right-handed 310
Helix 4
AA4
A
107 112Right-handed 310
Helix 5
AA5
A
119 128Right-handed alpha
Helix 6
AA6
A
129 132Right-handed 310
Helix 7
AA7
A
136 157Right-handed alpha
Helix 8
AA8
A
161 178Right-handed alpha
Helix 9
AA9
A
178 184Right-handed alpha
Helix 10
AB1
A
186 196Right-handed alpha
Helix 11
AB2
B
2 20Right-handed alpha
Helix 12
AB3
B
25 101Right-handed alpha
Helix 13
AB4
B
102 105Right-handed 310
Helix 14
AB5
B
108 113Right-handed alpha
Helix 15
AB6
B
119 131Right-handed alpha
Helix 16
AB7
B
136 157Right-handed alpha
Helix 17
AB8
B
159 161Right-handed 310
Helix 18
AB9
B
162 178Right-handed alpha
Helix 19
AC1
B
178 185Right-handed alpha
Helix 20
AC2
B
186 196Right-handed alpha
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There are no sheets in PDB entry 7JGV
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il