Analysis of interatomic Contacts of Structural Units in PDB entry:
7JH0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JH0 entry

There are 8 chains in PDB entry 7JH0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 152
A	THR 154	ALA 338
B	MET 1	SER 152
B	THR 154	ALA 338
C	MET 1	SER 152
C	THR 154	ALA 338
D	MET 1	SER 152
D	THR 154	ALA 338

There are 50 helices in PDB entry 7JH0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	26	Right-handed alpha
Helix 2	AA2	A	39	49	Right-handed alpha
Helix 3	AA3	A	81	85	Right-handed 310
Helix 4	AA4	A	86	91	Right-handed alpha
Helix 5	AA5	A	104	109	Right-handed alpha
Helix 6	AA6	A	137	141	Right-handed 310
Helix 7	AA7	A	152	169	Right-handed alpha
Helix 8	AA8	A	196	201	Right-handed 310
Helix 9	AA9	A	216	222	Right-handed alpha
Helix 10	AB1	A	223	226	Right-handed 310
Helix 11	AB2	A	255	269	Right-handed alpha
Helix 12	AB3	A	283	288	Right-handed 310
Helix 13	AB4	A	318	338	Right-handed alpha
Helix 14	AB5	B	12	26	Right-handed alpha
Helix 15	AB6	B	39	49	Right-handed alpha
Helix 16	AB7	B	81	85	Right-handed 310
Helix 17	AB8	B	104	109	Right-handed alpha
Helix 18	AB9	B	137	141	Right-handed 310
Helix 19	AC1	B	154	169	Right-handed alpha
Helix 20	AC2	B	196	200	Right-handed 310
Helix 21	AC3	B	217	222	Right-handed alpha
Helix 22	AC4	B	223	226	Right-handed 310
Helix 23	AC5	B	255	269	Right-handed alpha
Helix 24	AC6	B	283	288	Right-handed 310
Helix 25	AC7	B	318	337	Right-handed alpha
Helix 26	AC8	C	12	26	Right-handed alpha
Helix 27	AC9	C	39	49	Right-handed alpha
Helix 28	AD1	C	81	85	Right-handed 310
Helix 29	AD2	C	86	91	Right-handed alpha
Helix 30	AD3	C	107	111	Right-handed 310
Helix 31	AD4	C	154	170	Right-handed alpha
Helix 32	AD5	C	196	201	Right-handed 310
Helix 33	AD6	C	216	222	Right-handed alpha
Helix 34	AD7	C	223	226	Right-handed 310
Helix 35	AD8	C	255	268	Right-handed alpha
Helix 36	AD9	C	283	288	Right-handed 310
Helix 37	AE1	C	318	337	Right-handed alpha
Helix 38	AE2	D	12	26	Right-handed alpha
Helix 39	AE3	D	39	49	Right-handed alpha
Helix 40	AE4	D	81	85	Right-handed 310
Helix 41	AE5	D	86	91	Right-handed alpha
Helix 42	AE6	D	104	109	Right-handed alpha
Helix 43	AE7	D	110	112	Right-handed 310
Helix 44	AE8	D	137	141	Right-handed 310
Helix 45	AE9	D	154	170	Right-handed alpha
Helix 46	AF1	D	196	201	Right-handed 310
Helix 47	AF2	D	217	222	Right-handed alpha
Helix 48	AF3	D	223	226	Right-handed 310
Helix 49	AF4	D	255	269	Right-handed alpha
Helix 50	AF5	D	318	337	Right-handed alpha

There are 12 sheets in PDB entry 7JH0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	62	first strand
Strand 2	A	67	69	anti-parallel
Strand 3	A	72	77	anti-parallel
Strand 4	A	28	34	parallel
Strand 5	A	4	9	parallel
Strand 6	A	94	97	parallel
Strand 7	A	119	122	parallel
Strand 8	A	147	149	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	211	first strand
Strand 2	A	229	236	anti-parallel
Strand 3	A	171	181	parallel
Strand 4	A	242	250	anti-parallel
Strand 5	A	308	315	anti-parallel
Strand 6	A	294	297	anti-parallel
Strand 7	A	275	278	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	211	first strand
Strand 2	A	229	236	anti-parallel
Strand 3	A	171	181	parallel
Strand 4	A	242	250	anti-parallel
Strand 5	A	308	315	anti-parallel
Strand 6	A	302	303	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	66	69	anti-parallel
Strand 3	B	72	77	anti-parallel
Strand 4	B	28	34	parallel
Strand 5	B	4	9	parallel
Strand 6	B	94	97	parallel
Strand 7	B	119	122	parallel
Strand 8	B	147	149	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	208	212	first strand
Strand 2	B	229	235	anti-parallel
Strand 3	B	171	180	parallel
Strand 4	B	242	250	anti-parallel
Strand 5	B	308	315	anti-parallel
Strand 6	B	294	297	anti-parallel
Strand 7	B	275	278	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	208	212	first strand
Strand 2	B	229	235	anti-parallel
Strand 3	B	171	180	parallel
Strand 4	B	242	250	anti-parallel
Strand 5	B	308	315	anti-parallel
Strand 6	B	302	303	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	63	first strand
Strand 2	C	66	69	anti-parallel
Strand 3	C	73	77	anti-parallel
Strand 4	C	28	34	parallel
Strand 5	C	4	9	parallel
Strand 6	C	94	97	parallel
Strand 7	C	119	122	parallel
Strand 8	C	147	149	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	209	first strand
Strand 2	C	233	236	anti-parallel
Strand 3	C	171	181	parallel
Strand 4	C	242	250	anti-parallel
Strand 5	C	308	315	anti-parallel
Strand 6	C	294	297	anti-parallel
Strand 7	C	275	278	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	230	first strand
Strand 2	C	171	181	parallel
Strand 3	C	242	250	anti-parallel
Strand 4	C	308	315	anti-parallel
Strand 5	C	302	303	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	63	first strand
Strand 2	D	66	69	anti-parallel
Strand 3	D	73	77	anti-parallel
Strand 4	D	28	34	parallel
Strand 5	D	4	9	parallel
Strand 6	D	94	97	parallel
Strand 7	D	119	122	parallel
Strand 8	D	147	149	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	210	first strand
Strand 2	D	229	236	anti-parallel
Strand 3	D	171	181	parallel
Strand 4	D	242	250	anti-parallel
Strand 5	D	309	315	anti-parallel
Strand 6	D	294	297	anti-parallel
Strand 7	D	275	278	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	210	first strand
Strand 2	D	229	236	anti-parallel
Strand 3	D	171	181	parallel
Strand 4	D	242	250	anti-parallel
Strand 5	D	309	315	anti-parallel
Strand 6	D	302	303	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JH0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JH0