Analysis of interatomic Contacts of Structural Units in PDB entry:
7JJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JJL entry

There are 2 chains in PDB entry 7JJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 72GLN 483
B
 ARG 113VAL 118
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7JJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
72 81Right-handed alpha
Helix 2
AA2
A
84 101Right-handed alpha
Helix 3
AA3
A
106 113Right-handed alpha
Helix 4
AA4
A
114 123Right-handed alpha
Helix 5
AA5
A
128 143Right-handed alpha
Helix 6
AA6
A
146 156Right-handed alpha
Helix 7
AA7
A
158 166Right-handed alpha
Helix 8
AA8
A
170 186Right-handed alpha
Helix 9
AA9
A
188 198Right-handed alpha
Helix 10
AB1
A
200 206Right-handed alpha
Helix 11
AB2
A
213 229Right-handed alpha
Helix 12
AB3
A
236 251Right-handed alpha
Helix 13
AB4
A
255 271Right-handed alpha
Helix 14
AB5
A
273 283Right-handed alpha
Helix 15
AB6
A
285 290Right-handed alpha
Helix 16
AB7
A
291 295Right-handed 310
Helix 17
AB8
A
297 312Right-handed alpha
Helix 18
AB9
A
315 324Right-handed alpha
Helix 19
AC1
A
325 329Right-handed 310
Helix 20
AC2
A
330 336Right-handed alpha
Helix 21
AC3
A
339 355Right-handed alpha
Helix 22
AC4
A
357 367Right-handed alpha
Helix 23
AC5
A
369 380Right-handed alpha
Helix 24
AC6
A
381 399Right-handed alpha
Helix 25
AC7
A
400 409Right-handed alpha
Helix 26
AC8
A
412 418Right-handed alpha
Helix 27
AC9
A
424 442Right-handed alpha
Helix 28
AD1
A
446 457Right-handed alpha
Helix 29
AD2
A
458 466Right-handed alpha
Helix 30
AD3
A
470 483Right-handed alpha
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There are no sheets in PDB entry 7JJL
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