Analysis of interatomic Contacts of Structural Units in PDB entry:
7JJT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JJT entry

There is 1 chain in PDB entry 7JJT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 12GLU 524
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7JJT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 40Right-handed 310
Helix 2
AA2
A
50 57Right-handed alpha
Helix 3
AA3
A
57 62Right-handed alpha
Helix 4
AA4
A
105 119Right-handed alpha
Helix 5
AA5
A
136 148Right-handed alpha
Helix 6
AA6
A
153 158Right-handed 310
Helix 7
AA7
A
164 166Right-handed 310
Helix 8
AA8
A
196 212Right-handed alpha
Helix 9
AA9
A
222 227Right-handed 310
Helix 10
AB1
A
232 248Right-handed alpha
Helix 11
AB2
A
260 268Right-handed alpha
Helix 12
AB3
A
269 271Right-handed 310
Helix 13
AB4
A
277 281Right-handed 310
Helix 14
AB5
A
285 293Right-handed alpha
Helix 15
AB6
A
295 314Right-handed alpha
Helix 16
AB7
A
331 336Right-handed alpha
Helix 17
AB8
A
339 352Right-handed alpha
Helix 18
AB9
A
362 366Right-handed 310
Helix 19
AC1
A
374 379Right-handed 310
Helix 20
AC2
A
408 415Right-handed alpha
Helix 21
AC3
A
418 433Right-handed alpha
Helix 22
AC4
A
434 439Right-handed alpha
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There are 4 sheets in PDB entry 7JJT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 275first strand
Strand 2
A
252 255parallel
Strand 3
A
217 220parallel
Strand 4
A
122 127parallel
Strand 5
A
76 79parallel
Strand 6
A
32 35parallel
Strand 7
A
358 360parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
179 182anti-parallel
Strand 3
A
172 174anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 444first strand
Strand 2
A
452 459anti-parallel
Strand 3
A
462 469anti-parallel
Strand 4
A
517 522anti-parallel
Strand 5
A
488 494anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 479first strand
Strand 2
A
509 512anti-parallel
Strand 3
A
505 506anti-parallel
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