Analysis of interatomic Contacts of Structural Units in PDB entry:
7JL4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JL4 entry

There are 3 chains in PDB entry 7JL4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 313GLN 502
C
 VAL 319GLN 502
B
 VAL 315GLN 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7JL4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
320 327Right-handed alpha
Helix 2
AA2
A
328 330Right-handed 310
Helix 3
AA3
C
320 327Right-handed alpha
Helix 4
AA4
C
328 330Right-handed 310
Helix 5
AA5
C
336 340Right-handed 310
Helix 6
AA6
B
320 327Right-handed alpha
Helix 7
AA7
B
328 330Right-handed 310
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There are 6 sheets in PDB entry 7JL4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 347first strand
Strand 2
A
352 355anti-parallel
Strand 3
A
496 499anti-parallel
Strand 4
A
383 390anti-parallel
Strand 5
A
450 456anti-parallel
Strand 6
A
461 466anti-parallel
Strand 7
A
472 478anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 374first strand
Strand 2
A
486 491anti-parallel
Strand 3
A
395 400anti-parallel
Strand 4
A
422 427anti-parallel
Strand 5
A
431 436anti-parallel
Strand 6
A
439 444anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
344 347first strand
Strand 2
C
352 355anti-parallel
Strand 3
C
496 500anti-parallel
Strand 4
C
383 390anti-parallel
Strand 5
C
450 456anti-parallel
Strand 6
C
461 466anti-parallel
Strand 7
C
472 478anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
372 374first strand
Strand 2
C
486 491anti-parallel
Strand 3
C
395 400anti-parallel
Strand 4
C
422 427anti-parallel
Strand 5
C
431 436anti-parallel
Strand 6
C
439 444anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 347first strand
Strand 2
B
352 355anti-parallel
Strand 3
B
496 499anti-parallel
Strand 4
B
383 390anti-parallel
Strand 5
B
450 456anti-parallel
Strand 6
B
461 466anti-parallel
Strand 7
B
472 478anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 374first strand
Strand 2
B
486 491anti-parallel
Strand 3
B
395 400anti-parallel
Strand 4
B
422 427anti-parallel
Strand 5
B
431 436anti-parallel
Strand 6
B
439 444anti-parallel
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