Analysis of interatomic Contacts of Structural Units in PDB entry:
7JLI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JLI entry

There is 1 chain in PDB entry 7JLI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 20ILE 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7JLI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 28Right-handed alpha
Helix 2
AA2
A
41 49Right-handed alpha
Helix 3
AA3
A
52 74Right-handed alpha
Helix 4
AA4
A
85 89Right-handed 310
Helix 5
AA5
A
92 117Right-handed alpha
Helix 6
AA6
A
126 130Right-handed 310
Helix 7
AA7
A
131 146Right-handed alpha
Helix 8
AA8
A
160 179Right-handed alpha
Helix 9
AA9
A
182 186Right-handed 310
Helix 10
AB1
A
187 193Right-handed alpha
Helix 11
AB2
A
234 238Right-handed 310
Helix 12
AB3
A
239 255Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7JLI.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 124first strand
Strand 2
A
152 156parallel
Strand 3
A
78 82parallel
Strand 4
A
34 38parallel
Strand 5
A
205 208parallel
Strand 6
A
227 230parallel
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