Analysis of interatomic Contacts of Structural Units in PDB entry:
7JLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JLJ entry

There is 1 chain in PDB entry 7JLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 20ILE 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7JLJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 29Right-handed alpha
Helix 2
AA2
A
41 49Right-handed alpha
Helix 3
AA3
A
52 75Right-handed alpha
Helix 4
AA4
A
92 100Right-handed alpha
Helix 5
AA5
A
101 116Right-handed alpha
Helix 6
AA6
A
127 130Right-handed 310
Helix 7
AA7
A
131 144Right-handed alpha
Helix 8
AA8
A
160 178Right-handed alpha
Helix 9
AA9
A
182 186Right-handed 310
Helix 10
AB1
A
187 194Right-handed alpha
Helix 11
AB2
A
234 238Right-handed 310
Helix 12
AB3
A
239 254Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7JLJ.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 125first strand
Strand 2
A
152 157parallel
Strand 3
A
78 83parallel
Strand 4
A
34 39parallel
Strand 5
A
205 208parallel
Strand 6
A
227 230parallel
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