Analysis of interatomic Contacts of Structural Units in PDB entry:
7JLO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JLO entry

There are 3 chains in PDB entry 7JLO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 36PRO 532
B
 PRO 36PRO 532
C
 PRO 36PRO 532
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 7JLO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 56Right-handed alpha
Helix 2
AA2
A
58 86Right-handed alpha
Helix 3
AA3
A
111 116Right-handed alpha
Helix 4
AA4
A
118 128Right-handed alpha
Helix 5
AA5
A
130 168Right-handed alpha
Helix 6
AA6
A
179 190Right-handed alpha
Helix 7
AA7
A
204 213Right-handed alpha
Helix 8
AA8
A
213 226Right-handed alpha
Helix 9
AA9
A
244 256Right-handed alpha
Helix 10
AB1
A
270 275Right-handed 310
Helix 11
AB2
A
278 300Right-handed alpha
Helix 12
AB3
A
300 317Right-handed alpha
Helix 13
AB4
A
318 323Right-handed alpha
Helix 14
AB5
A
324 328Right-handed 310
Helix 15
AB6
A
333 340Right-handed alpha
Helix 16
AB7
A
346 357Right-handed alpha
Helix 17
AB8
A
358 367Right-handed alpha
Helix 18
AB9
A
370 398Right-handed alpha
Helix 19
AC1
A
399 404Right-handed 310
Helix 20
AC2
A
406 422Right-handed alpha
Helix 21
AC3
A
433 446Right-handed alpha
Helix 22
AC4
A
449 453Right-handed 310
Helix 23
AC5
A
460 466Right-handed alpha
Helix 24
AC6
A
472 481Right-handed alpha
Helix 25
AC7
A
481 492Right-handed alpha
Helix 26
AC8
A
497 508Right-handed alpha
Helix 27
AC9
B
42 56Right-handed alpha
Helix 28
AD1
B
58 86Right-handed alpha
Helix 29
AD2
B
111 116Right-handed alpha
Helix 30
AD3
B
118 128Right-handed alpha
Helix 31
AD4
B
130 168Right-handed alpha
Helix 32
AD5
B
179 190Right-handed alpha
Helix 33
AD6
B
204 213Right-handed alpha
Helix 34
AD7
B
213 226Right-handed alpha
Helix 35
AD8
B
244 256Right-handed alpha
Helix 36
AD9
B
270 275Right-handed 310
Helix 37
AE1
B
278 300Right-handed alpha
Helix 38
AE2
B
300 317Right-handed alpha
Helix 39
AE3
B
318 323Right-handed alpha
Helix 40
AE4
B
324 328Right-handed 310
Helix 41
AE5
B
333 340Right-handed alpha
Helix 42
AE6
B
346 357Right-handed alpha
Helix 43
AE7
B
358 367Right-handed alpha
Helix 44
AE8
B
370 398Right-handed alpha
Helix 45
AE9
B
399 404Right-handed 310
Helix 46
AF1
B
406 422Right-handed alpha
Helix 47
AF2
B
433 446Right-handed alpha
Helix 48
AF3
B
449 453Right-handed 310
Helix 49
AF4
B
460 466Right-handed alpha
Helix 50
AF5
B
472 481Right-handed alpha
Helix 51
AF6
B
481 492Right-handed alpha
Helix 52
AF7
B
497 508Right-handed alpha
Helix 53
AF8
C
42 56Right-handed alpha
Helix 54
AF9
C
58 86Right-handed alpha
Helix 55
AG1
C
111 116Right-handed alpha
Helix 56
AG2
C
118 128Right-handed alpha
Helix 57
AG3
C
130 168Right-handed alpha
Helix 58
AG4
C
179 190Right-handed alpha
Helix 59
AG5
C
204 213Right-handed alpha
Helix 60
AG6
C
213 226Right-handed alpha
Helix 61
AG7
C
244 256Right-handed alpha
Helix 62
AG8
C
270 275Right-handed 310
Helix 63
AG9
C
278 300Right-handed alpha
Helix 64
AH1
C
300 317Right-handed alpha
Helix 65
AH2
C
318 323Right-handed alpha
Helix 66
AH3
C
324 328Right-handed 310
Helix 67
AH4
C
333 340Right-handed alpha
Helix 68
AH5
C
346 357Right-handed alpha
Helix 69
AH6
C
358 367Right-handed alpha
Helix 70
AH7
C
370 398Right-handed alpha
Helix 71
AH8
C
399 404Right-handed 310
Helix 72
AH9
C
406 422Right-handed alpha
Helix 73
AI1
C
433 446Right-handed alpha
Helix 74
AI2
C
449 453Right-handed 310
Helix 75
AI3
C
460 466Right-handed alpha
Helix 76
AI4
C
472 481Right-handed alpha
Helix 77
AI5
C
481 492Right-handed alpha
Helix 78
AI6
C
497 508Right-handed alpha
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There are 9 sheets in PDB entry 7JLO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
238 241anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 332first strand
Strand 2
A
469 471anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 512first strand
Strand 2
A
516 519anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
238 241anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 332first strand
Strand 2
B
469 471anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
509 512first strand
Strand 2
B
516 519anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
231 234first strand
Strand 2
C
238 241anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
330 332first strand
Strand 2
C
469 471anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
509 512first strand
Strand 2
C
516 519anti-parallel
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