Analysis of interatomic Contacts of Structural Units in PDB entry:
7JLU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JLU entry

There are 2 chains in PDB entry 7JLU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 526LEU 1303
B
 LEU 89ALA 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7JLU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
540 546Right-handed alpha
Helix 2
AA2
A
550 554Right-handed 310
Helix 3
AA3
A
663 669Right-handed 310
Helix 4
AA4
A
733 742Right-handed 310
Helix 5
AA5
A
757 763Right-handed 310
Helix 6
AA6
A
803 808Right-handed 310
Helix 7
AA7
A
827 831Right-handed 310
Helix 8
AA8
A
896 901Right-handed 310
Helix 9
AA9
A
945 949Right-handed 310
Helix 10
AB1
A
970 976Right-handed alpha
Helix 11
AB2
A
977 981Right-handed 310
Helix 12
AB3
A
1044 1052Right-handed alpha
Helix 13
AB4
A
1065 1072Right-handed alpha
Helix 14
AB5
A
1075 1079Right-handed 310
Helix 15
AB6
A
1083 1100Right-handed alpha
Helix 16
AB7
A
1145 1149Right-handed 310
Helix 17
AB8
A
1166 1178Right-handed alpha
Helix 18
AB9
A
1183 1190Right-handed 310
Helix 19
AC1
B
90 103Right-handed alpha
Helix 20
AC2
B
121 136Right-handed alpha
Helix 21
AC3
B
150 168Right-handed alpha
Helix 22
AC4
B
184 192Right-handed alpha
Helix 23
AC5
B
195 199Right-handed 310
Helix 24
AC6
B
213 223Right-handed alpha
Helix 25
AC7
B
235 243Right-handed alpha
Helix 26
AC8
B
245 252Right-handed alpha
Helix 27
AC9
B
278 284Right-handed alpha
Helix 28
AD1
B
284 298Right-handed alpha
Helix 29
AD2
B
308 313Right-handed alpha
Helix 30
AD3
B
317 325Right-handed alpha
Helix 31
AD4
B
328 350Right-handed alpha
Helix 32
AD5
B
351 353Right-handed 310
Helix 33
AD6
B
358 366Right-handed alpha
Helix 34
AD7
B
384 389Right-handed alpha
Helix 35
AD8
B
390 392Right-handed 310
Helix 36
AD9
B
398 407Right-handed alpha
Helix 37
AE1
B
407 415Right-handed alpha
Helix 38
AE2
B
438 452Right-handed alpha
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There are 5 sheets in PDB entry 7JLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 531first strand
Strand 2
A
559 562parallel
Strand 3
A
582 585parallel
Strand 4
A
604 607parallel
Strand 5
A
627 631parallel
Strand 6
A
650 654parallel
Strand 7
A
674 678parallel
Strand 8
A
697 701parallel
Strand 9
A
721 725parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
689 690first strand
Strand 2
A
711 712parallel
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There are 17 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
744 748first strand
Strand 2
A
765 771parallel
Strand 3
A
789 795parallel
Strand 4
A
812 816parallel
Strand 5
A
836 840parallel
Strand 6
A
883 887parallel
Strand 7
A
907 911parallel
Strand 8
A
931 934parallel
Strand 9
A
954 958parallel
Strand 10
A
992 996parallel
Strand 11
A
1015 1019parallel
Strand 12
A
1036 1040parallel
Strand 13
A
1060 1064parallel
Strand 14
A
1115 1120parallel
Strand 15
A
1237 1247anti-parallel
Strand 16
A
1151 1163anti-parallel
Strand 17
A
1284 1290anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1139 1140first strand
Strand 2
A
1268 1271anti-parallel
Strand 3
A
1198 1208anti-parallel
Strand 4
A
1223 1232anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 176first strand
Strand 2
B
139 146parallel
Strand 3
B
109 115parallel
Strand 4
B
227 231parallel
Strand 5
B
253 259parallel
Strand 6
B
302 305parallel
Strand 7
B
428 431parallel
Strand 8
B
418 419anti-parallel
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