Analysis of interatomic Contacts of Structural Units in PDB entry:
7JMT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JMT entry

There are 6 chains in PDB entry 7JMT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ARG 169
B
 THR 4ARG 169
C
 ALA 5ARG 169
D
 ALA 5ARG 169
E
 ALA 5ARG 169
F
 THR 4ARG 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7JMT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 26Right-handed alpha
Helix 2
AA2
A
30 35Right-handed alpha
Helix 3
AA3
A
41 45Right-handed 310
Helix 4
AA4
A
47 66Right-handed alpha
Helix 5
AA5
A
74 80Right-handed alpha
Helix 6
AA6
A
88 104Right-handed alpha
Helix 7
AA7
A
108 128Right-handed alpha
Helix 8
AA8
A
131 149Right-handed alpha
Helix 9
AA9
A
150 156Right-handed alpha
Helix 10
AB1
A
157 161Right-handed 310
Helix 11
AB2
A
162 168Right-handed alpha
Helix 12
AB3
B
6 26Right-handed alpha
Helix 13
AB4
B
30 35Right-handed alpha
Helix 14
AB5
B
41 45Right-handed 310
Helix 15
AB6
B
47 66Right-handed alpha
Helix 16
AB7
B
88 104Right-handed alpha
Helix 17
AB8
B
108 128Right-handed alpha
Helix 18
AB9
B
131 149Right-handed alpha
Helix 19
AC1
B
150 156Right-handed alpha
Helix 20
AC2
B
161 167Right-handed alpha
Helix 21
AC3
C
6 25Right-handed alpha
Helix 22
AC4
C
30 35Right-handed alpha
Helix 23
AC5
C
41 45Right-handed 310
Helix 24
AC6
C
47 66Right-handed alpha
Helix 25
AC7
C
68 80Right-handed alpha
Helix 26
AC8
C
88 104Right-handed alpha
Helix 27
AC9
C
108 128Right-handed alpha
Helix 28
AD1
C
131 150Right-handed alpha
Helix 29
AD2
C
150 156Right-handed alpha
Helix 30
AD3
C
159 161Right-handed 310
Helix 31
AD4
C
162 168Right-handed alpha
Helix 32
AD5
D
6 26Right-handed alpha
Helix 33
AD6
D
30 35Right-handed alpha
Helix 34
AD7
D
41 45Right-handed 310
Helix 35
AD8
D
47 66Right-handed alpha
Helix 36
AD9
D
88 104Right-handed alpha
Helix 37
AE1
D
108 128Right-handed alpha
Helix 38
AE2
D
131 150Right-handed alpha
Helix 39
AE3
D
150 156Right-handed alpha
Helix 40
AE4
D
158 160Right-handed 310
Helix 41
AE5
D
161 168Right-handed alpha
Helix 42
AE6
E
6 26Right-handed alpha
Helix 43
AE7
E
30 34Right-handed 310
Helix 44
AE8
E
41 45Right-handed 310
Helix 45
AE9
E
47 66Right-handed alpha
Helix 46
AF1
E
74 79Right-handed alpha
Helix 47
AF2
E
88 104Right-handed alpha
Helix 48
AF3
E
108 128Right-handed alpha
Helix 49
AF4
E
131 150Right-handed alpha
Helix 50
AF5
E
150 156Right-handed alpha
Helix 51
AF6
E
159 168Right-handed 310
Helix 52
AF7
F
6 25Right-handed alpha
Helix 53
AF8
F
30 35Right-handed alpha
Helix 54
AF9
F
41 45Right-handed 310
Helix 55
AG1
F
47 66Right-handed alpha
Helix 56
AG2
F
74 80Right-handed alpha
Helix 57
AG3
F
88 104Right-handed alpha
Helix 58
AG4
F
108 128Right-handed alpha
Helix 59
AG5
F
131 150Right-handed alpha
Helix 60
AG6
F
150 156Right-handed alpha
Helix 61
AG7
F
161 167Right-handed alpha
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There are no sheets in PDB entry 7JMT
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