Analysis of interatomic Contacts of Structural Units in PDB entry:
7JOU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JOU entry

There is 1 chain in PDB entry 7JOU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 9ASN 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7JOU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 20Right-handed alpha
Helix 2
AA2
A
26 42Right-handed alpha
Helix 3
AA3
A
43 48Right-handed alpha
Helix 4
AA4
A
49 68Right-handed alpha
Helix 5
AA5
A
72 74Right-handed 310
Helix 6
AA6
A
109 115Right-handed alpha
Helix 7
AA7
A
120 131Right-handed alpha
Helix 8
AA8
A
161 168Right-handed alpha
Helix 9
AA9
A
171 192Right-handed alpha
Helix 10
AB1
A
200 202Right-handed 310
Helix 11
AB2
A
243 248Right-handed alpha
Helix 12
AB3
A
257 274Right-handed alpha
Helix 13
AB4
A
292 297Right-handed alpha
Helix 14
AB5
A
306 317Right-handed alpha
Helix 15
AB6
A
329 334Right-handed alpha
Helix 16
AB7
A
335 339Right-handed 310
Helix 17
AB8
A
344 351Right-handed 310
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There are 2 sheets in PDB entry 7JOU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 85first strand
Strand 2
A
88 95anti-parallel
Strand 3
A
101 108anti-parallel
Strand 4
A
148 154anti-parallel
Strand 5
A
139 144anti-parallel
Strand 6
A
399 400anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 160first strand
Strand 2
A
204 206anti-parallel
Strand 3
A
212 214anti-parallel
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