Analysis of interatomic Contacts of Structural Units in PDB entry:
7JQX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JQX entry

There are 4 chains in PDB entry 7JQX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 11GLU 304
B
 PRO 11GLU 304
C
 PRO 11GLU 304
D
 PRO 11GLU 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 7JQX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 25Right-handed alpha
Helix 2
AA2
A
60 65Right-handed 310
Helix 3
AA3
A
67 74Right-handed alpha
Helix 4
AA4
A
97 112Right-handed alpha
Helix 5
AA5
A
123 136Right-handed alpha
Helix 6
AA6
A
153 163Right-handed alpha
Helix 7
AA7
A
164 167Right-handed 310
Helix 8
AA8
A
168 174Right-handed alpha
Helix 9
AA9
A
177 184Right-handed alpha
Helix 10
AB1
A
186 199Right-handed alpha
Helix 11
AB2
A
204 216Right-handed alpha
Helix 12
AB3
A
219 230Right-handed alpha
Helix 13
AB4
A
230 242Right-handed alpha
Helix 14
AB5
A
261 269Right-handed alpha
Helix 15
AB6
A
285 290Right-handed alpha
Helix 16
AB7
A
290 304Right-handed alpha
Helix 17
AB8
B
21 25Right-handed alpha
Helix 18
AB9
B
60 65Right-handed 310
Helix 19
AC1
B
67 74Right-handed alpha
Helix 20
AC2
B
97 112Right-handed alpha
Helix 21
AC3
B
123 136Right-handed alpha
Helix 22
AC4
B
153 162Right-handed alpha
Helix 23
AC5
B
164 167Right-handed 310
Helix 24
AC6
B
168 174Right-handed alpha
Helix 25
AC7
B
177 184Right-handed alpha
Helix 26
AC8
B
186 199Right-handed alpha
Helix 27
AC9
B
204 216Right-handed alpha
Helix 28
AD1
B
219 230Right-handed alpha
Helix 29
AD2
B
230 242Right-handed alpha
Helix 30
AD3
B
261 269Right-handed alpha
Helix 31
AD4
B
285 290Right-handed alpha
Helix 32
AD5
B
290 304Right-handed alpha
Helix 33
AD6
C
21 25Right-handed alpha
Helix 34
AD7
C
60 65Right-handed 310
Helix 35
AD8
C
67 74Right-handed alpha
Helix 36
AD9
C
97 112Right-handed alpha
Helix 37
AE1
C
123 136Right-handed alpha
Helix 38
AE2
C
153 162Right-handed alpha
Helix 39
AE3
C
164 167Right-handed 310
Helix 40
AE4
C
168 174Right-handed alpha
Helix 41
AE5
C
177 184Right-handed alpha
Helix 42
AE6
C
186 199Right-handed alpha
Helix 43
AE7
C
204 216Right-handed alpha
Helix 44
AE8
C
219 230Right-handed alpha
Helix 45
AE9
C
230 242Right-handed alpha
Helix 46
AF1
C
261 269Right-handed alpha
Helix 47
AF2
C
285 290Right-handed alpha
Helix 48
AF3
C
290 304Right-handed alpha
Helix 49
AF4
D
21 26Right-handed alpha
Helix 50
AF5
D
60 65Right-handed 310
Helix 51
AF6
D
67 74Right-handed alpha
Helix 52
AF7
D
97 112Right-handed alpha
Helix 53
AF8
D
123 136Right-handed alpha
Helix 54
AF9
D
153 162Right-handed alpha
Helix 55
AG1
D
164 167Right-handed 310
Helix 56
AG2
D
168 174Right-handed alpha
Helix 57
AG3
D
177 184Right-handed alpha
Helix 58
AG4
D
186 199Right-handed alpha
Helix 59
AG5
D
204 216Right-handed alpha
Helix 60
AG6
D
219 230Right-handed alpha
Helix 61
AG7
D
230 242Right-handed alpha
Helix 62
AG8
D
261 269Right-handed alpha
Helix 63
AG9
D
285 290Right-handed alpha
Helix 64
AH1
D
290 304Right-handed alpha
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There are 4 sheets in PDB entry 7JQX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 32first strand
Strand 2
A
37 43anti-parallel
Strand 3
A
77 82anti-parallel
Strand 4
A
50 54parallel
Strand 5
A
117 122parallel
Strand 6
A
140 146parallel
Strand 7
A
250 255parallel
Strand 8
A
274 279parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 32first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
50 54parallel
Strand 5
B
117 122parallel
Strand 6
B
140 146parallel
Strand 7
B
250 255parallel
Strand 8
B
274 279parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 32first strand
Strand 2
C
37 43anti-parallel
Strand 3
C
77 82anti-parallel
Strand 4
C
50 54parallel
Strand 5
C
117 122parallel
Strand 6
C
140 146parallel
Strand 7
C
250 255parallel
Strand 8
C
274 279parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 33first strand
Strand 2
D
36 43anti-parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
50 54parallel
Strand 5
D
117 122parallel
Strand 6
D
140 146parallel
Strand 7
D
250 255parallel
Strand 8
D
274 279parallel
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