Analysis of interatomic Contacts of Structural Units in PDB entry:
7JQZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JQZ entry

There are 10 chains in PDB entry 7JQZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 16	ARG 309
B	THR 16	ARG 309
C	THR 16	ARG 309
D	THR 16	ARG 309
E	THR 16	ARG 309
F	THR 16	ARG 309
G	THR 16	ARG 309
H	THR 16	ARG 309
I	THR 16	ARG 309
J	THR 16	ARG 309

There are150 helices in PDB entry 7JQZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	62	67	Right-handed 310
Helix 2	AA2	A	69	74	Right-handed alpha
Helix 3	AA3	A	98	113	Right-handed alpha
Helix 4	AA4	A	124	137	Right-handed alpha
Helix 5	AA5	A	166	170	Right-handed 310
Helix 6	AA6	A	171	178	Right-handed alpha
Helix 7	AA7	A	180	187	Right-handed alpha
Helix 8	AA8	A	189	202	Right-handed alpha
Helix 9	AA9	A	204	208	Right-handed 310
Helix 10	AB1	A	209	222	Right-handed alpha
Helix 11	AB2	A	224	235	Right-handed alpha
Helix 12	AB3	A	235	248	Right-handed alpha
Helix 13	AB4	A	269	275	Right-handed alpha
Helix 14	AB5	A	291	296	Right-handed alpha
Helix 15	AB6	A	296	308	Right-handed alpha
Helix 16	AB7	B	62	67	Right-handed 310
Helix 17	AB8	B	69	74	Right-handed alpha
Helix 18	AB9	B	98	113	Right-handed alpha
Helix 19	AC1	B	124	137	Right-handed alpha
Helix 20	AC2	B	166	171	Right-handed alpha
Helix 21	AC3	B	171	178	Right-handed alpha
Helix 22	AC4	B	180	187	Right-handed alpha
Helix 23	AC5	B	189	202	Right-handed alpha
Helix 24	AC6	B	204	208	Right-handed 310
Helix 25	AC7	B	209	222	Right-handed alpha
Helix 26	AC8	B	224	235	Right-handed alpha
Helix 27	AC9	B	235	249	Right-handed alpha
Helix 28	AD1	B	269	274	Right-handed alpha
Helix 29	AD2	B	291	296	Right-handed alpha
Helix 30	AD3	B	296	308	Right-handed alpha
Helix 31	AD4	C	62	67	Right-handed 310
Helix 32	AD5	C	69	74	Right-handed alpha
Helix 33	AD6	C	98	113	Right-handed alpha
Helix 34	AD7	C	124	137	Right-handed alpha
Helix 35	AD8	C	166	170	Right-handed 310
Helix 36	AD9	C	171	178	Right-handed alpha
Helix 37	AE1	C	180	187	Right-handed alpha
Helix 38	AE2	C	189	202	Right-handed alpha
Helix 39	AE3	C	204	208	Right-handed 310
Helix 40	AE4	C	209	221	Right-handed alpha
Helix 41	AE5	C	224	235	Right-handed alpha
Helix 42	AE6	C	235	249	Right-handed alpha
Helix 43	AE7	C	269	274	Right-handed alpha
Helix 44	AE8	C	291	296	Right-handed alpha
Helix 45	AE9	C	296	308	Right-handed alpha
Helix 46	AF1	D	62	67	Right-handed 310
Helix 47	AF2	D	69	74	Right-handed alpha
Helix 48	AF3	D	98	113	Right-handed alpha
Helix 49	AF4	D	124	137	Right-handed alpha
Helix 50	AF5	D	166	170	Right-handed 310
Helix 51	AF6	D	171	178	Right-handed alpha
Helix 52	AF7	D	180	187	Right-handed alpha
Helix 53	AF8	D	189	202	Right-handed alpha
Helix 54	AF9	D	204	208	Right-handed 310
Helix 55	AG1	D	209	222	Right-handed alpha
Helix 56	AG2	D	224	235	Right-handed alpha
Helix 57	AG3	D	235	249	Right-handed alpha
Helix 58	AG4	D	269	274	Right-handed alpha
Helix 59	AG5	D	291	296	Right-handed alpha
Helix 60	AG6	D	296	308	Right-handed alpha
Helix 61	AG7	E	62	67	Right-handed 310
Helix 62	AG8	E	69	75	Right-handed alpha
Helix 63	AG9	E	98	113	Right-handed alpha
Helix 64	AH1	E	124	137	Right-handed alpha
Helix 65	AH2	E	163	168	Right-handed alpha
Helix 66	AH3	E	171	178	Right-handed alpha
Helix 67	AH4	E	180	187	Right-handed alpha
Helix 68	AH5	E	189	202	Right-handed alpha
Helix 69	AH6	E	204	208	Right-handed 310
Helix 70	AH7	E	209	222	Right-handed alpha
Helix 71	AH8	E	224	235	Right-handed alpha
Helix 72	AH9	E	235	248	Right-handed alpha
Helix 73	AI1	E	269	274	Right-handed alpha
Helix 74	AI2	E	291	296	Right-handed alpha
Helix 75	AI3	E	296	308	Right-handed alpha
Helix 76	AI4	F	62	67	Right-handed 310
Helix 77	AI5	F	69	74	Right-handed alpha
Helix 78	AI6	F	98	113	Right-handed alpha
Helix 79	AI7	F	124	137	Right-handed alpha
Helix 80	AI8	F	163	168	Right-handed alpha
Helix 81	AI9	F	171	178	Right-handed alpha
Helix 82	AJ1	F	180	187	Right-handed alpha
Helix 83	AJ2	F	189	202	Right-handed alpha
Helix 84	AJ3	F	204	208	Right-handed 310
Helix 85	AJ4	F	209	222	Right-handed alpha
Helix 86	AJ5	F	224	235	Right-handed alpha
Helix 87	AJ6	F	235	248	Right-handed alpha
Helix 88	AJ7	F	269	274	Right-handed alpha
Helix 89	AJ8	F	291	296	Right-handed alpha
Helix 90	AJ9	F	296	308	Right-handed alpha
Helix 91	AK1	G	62	67	Right-handed 310
Helix 92	AK2	G	69	75	Right-handed alpha
Helix 93	AK3	G	98	113	Right-handed alpha
Helix 94	AK4	G	124	137	Right-handed alpha
Helix 95	AK5	G	166	171	Right-handed alpha
Helix 96	AK6	G	171	178	Right-handed alpha
Helix 97	AK7	G	180	187	Right-handed alpha
Helix 98	AK8	G	189	202	Right-handed alpha
Helix 99	AK9	G	204	208	Right-handed 310
Helix 100	AL1	G	209	222	Right-handed alpha
Helix 101	AL2	G	224	235	Right-handed alpha
Helix 102	AL3	G	235	248	Right-handed alpha
Helix 103	AL4	G	269	274	Right-handed alpha
Helix 104	AL5	G	291	296	Right-handed alpha
Helix 105	AL6	G	296	308	Right-handed alpha
Helix 106	AL7	H	62	67	Right-handed 310
Helix 107	AL8	H	69	74	Right-handed alpha
Helix 108	AL9	H	98	113	Right-handed alpha
Helix 109	AM1	H	124	137	Right-handed alpha
Helix 110	AM2	H	166	171	Right-handed alpha
Helix 111	AM3	H	171	178	Right-handed alpha
Helix 112	AM4	H	180	187	Right-handed alpha
Helix 113	AM5	H	189	201	Right-handed alpha
Helix 114	AM6	H	204	208	Right-handed 310
Helix 115	AM7	H	209	221	Right-handed alpha
Helix 116	AM8	H	224	235	Right-handed alpha
Helix 117	AM9	H	235	248	Right-handed alpha
Helix 118	AN1	H	269	274	Right-handed alpha
Helix 119	AN2	H	291	296	Right-handed alpha
Helix 120	AN3	H	296	308	Right-handed alpha
Helix 121	AN4	I	62	67	Right-handed 310
Helix 122	AN5	I	69	74	Right-handed alpha
Helix 123	AN6	I	98	113	Right-handed alpha
Helix 124	AN7	I	124	137	Right-handed alpha
Helix 125	AN8	I	166	170	Right-handed 310
Helix 126	AN9	I	171	178	Right-handed alpha
Helix 127	AO1	I	180	187	Right-handed alpha
Helix 128	AO2	I	189	202	Right-handed alpha
Helix 129	AO3	I	204	208	Right-handed 310
Helix 130	AO4	I	209	222	Right-handed alpha
Helix 131	AO5	I	224	235	Right-handed alpha
Helix 132	AO6	I	235	248	Right-handed alpha
Helix 133	AO7	I	269	274	Right-handed alpha
Helix 134	AO8	I	291	296	Right-handed alpha
Helix 135	AO9	I	296	308	Right-handed alpha
Helix 136	AP1	J	62	67	Right-handed 310
Helix 137	AP2	J	69	74	Right-handed alpha
Helix 138	AP3	J	98	113	Right-handed alpha
Helix 139	AP4	J	124	137	Right-handed alpha
Helix 140	AP5	J	166	170	Right-handed 310
Helix 141	AP6	J	171	178	Right-handed alpha
Helix 142	AP7	J	180	187	Right-handed alpha
Helix 143	AP8	J	189	202	Right-handed alpha
Helix 144	AP9	J	204	208	Right-handed 310
Helix 145	AQ1	J	209	222	Right-handed alpha
Helix 146	AQ2	J	224	235	Right-handed alpha
Helix 147	AQ3	J	235	248	Right-handed alpha
Helix 148	AQ4	J	269	274	Right-handed alpha
Helix 149	AQ5	J	291	296	Right-handed alpha
Helix 150	AQ6	J	296	308	Right-handed alpha

There are 15 sheets in PDB entry 7JQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	21	first strand
Strand 2	A	29	35	anti-parallel
Strand 3	A	38	46	anti-parallel
Strand 4	A	78	82	anti-parallel
Strand 5	A	52	56	parallel
Strand 6	A	118	123	parallel
Strand 7	A	141	147	parallel
Strand 8	A	256	261	parallel
Strand 9	A	280	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	161	first strand
Strand 2	B	159	161	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	21	first strand
Strand 2	B	29	35	anti-parallel
Strand 3	B	38	46	anti-parallel
Strand 4	B	78	82	anti-parallel
Strand 5	B	52	56	parallel
Strand 6	B	118	123	parallel
Strand 7	B	141	147	parallel
Strand 8	B	256	261	parallel
Strand 9	B	280	285	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	21	first strand
Strand 2	C	29	35	anti-parallel
Strand 3	C	38	46	anti-parallel
Strand 4	C	78	82	anti-parallel
Strand 5	C	52	56	parallel
Strand 6	C	118	123	parallel
Strand 7	C	141	147	parallel
Strand 8	C	256	261	parallel
Strand 9	C	280	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	161	first strand
Strand 2	D	159	161	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	21	first strand
Strand 2	D	29	35	anti-parallel
Strand 3	D	38	46	anti-parallel
Strand 4	D	78	82	anti-parallel
Strand 5	D	52	56	parallel
Strand 6	D	118	123	parallel
Strand 7	D	141	147	parallel
Strand 8	D	256	261	parallel
Strand 9	D	280	285	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	21	first strand
Strand 2	E	29	35	anti-parallel
Strand 3	E	38	46	anti-parallel
Strand 4	E	78	82	anti-parallel
Strand 5	E	52	56	parallel
Strand 6	E	118	123	parallel
Strand 7	E	141	147	parallel
Strand 8	E	256	261	parallel
Strand 9	E	280	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	161	first strand
Strand 2	F	159	161	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	21	first strand
Strand 2	F	29	35	anti-parallel
Strand 3	F	38	46	anti-parallel
Strand 4	F	78	82	anti-parallel
Strand 5	F	52	56	parallel
Strand 6	F	118	123	parallel
Strand 7	F	141	147	parallel
Strand 8	F	256	261	parallel
Strand 9	F	280	285	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	20	21	first strand
Strand 2	G	28	35	anti-parallel
Strand 3	G	38	46	anti-parallel
Strand 4	G	77	82	anti-parallel
Strand 5	G	51	56	parallel
Strand 6	G	118	123	parallel
Strand 7	G	141	147	parallel
Strand 8	G	256	261	parallel
Strand 9	G	280	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	159	161	first strand
Strand 2	H	159	161	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	21	first strand
Strand 2	H	29	35	anti-parallel
Strand 3	H	38	46	anti-parallel
Strand 4	H	78	82	anti-parallel
Strand 5	H	52	56	parallel
Strand 6	H	118	123	parallel
Strand 7	H	141	147	parallel
Strand 8	H	256	261	parallel
Strand 9	H	280	285	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	20	21	first strand
Strand 2	I	29	35	anti-parallel
Strand 3	I	38	46	anti-parallel
Strand 4	I	77	82	anti-parallel
Strand 5	I	51	56	parallel
Strand 6	I	118	123	parallel
Strand 7	I	141	147	parallel
Strand 8	I	256	261	parallel
Strand 9	I	280	285	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	159	161	first strand
Strand 2	J	159	161	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	20	21	first strand
Strand 2	J	29	35	anti-parallel
Strand 3	J	38	46	anti-parallel
Strand 4	J	78	82	anti-parallel
Strand 5	J	52	56	parallel
Strand 6	J	118	123	parallel
Strand 7	J	141	147	parallel
Strand 8	J	256	261	parallel
Strand 9	J	280	285	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JQZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JQZ