Analysis of interatomic Contacts of Structural Units in PDB entry:
7JSK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JSK entry

There are 2 chains in PDB entry 7JSK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13ASN 562
B
 SER 13ASN 562
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 7JSK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 20Right-handed alpha
Helix 2
AA2
A
21 23Right-handed 310
Helix 3
AA3
A
24 29Right-handed alpha
Helix 4
AA4
A
33 51Right-handed alpha
Helix 5
AA5
A
55 60Right-handed alpha
Helix 6
AA6
A
61 67Right-handed alpha
Helix 7
AA7
A
74 80Right-handed alpha
Helix 8
AA8
A
81 83Right-handed 310
Helix 9
AA9
A
84 103Right-handed alpha
Helix 10
AB1
A
105 118Right-handed alpha
Helix 11
AB2
A
120 137Right-handed alpha
Helix 12
AB3
A
141 158Right-handed alpha
Helix 13
AB4
A
202 220Right-handed alpha
Helix 14
AB5
A
221 223Right-handed 310
Helix 15
AB6
A
227 241Right-handed alpha
Helix 16
AB7
A
249 276Right-handed alpha
Helix 17
AB8
A
292 297Right-handed alpha
Helix 18
AB9
A
298 310Right-handed alpha
Helix 19
AC1
A
313 333Right-handed alpha
Helix 20
AC2
A
355 367Right-handed alpha
Helix 21
AC3
A
398 405Right-handed alpha
Helix 22
AC4
A
407 428Right-handed alpha
Helix 23
AC5
A
428 437Right-handed alpha
Helix 24
AC6
A
438 443Right-handed 310
Helix 25
AC7
A
444 460Right-handed alpha
Helix 26
AC8
A
464 483Right-handed alpha
Helix 27
AC9
A
487 499Right-handed alpha
Helix 28
AD1
A
508 516Right-handed alpha
Helix 29
AD2
A
521 547Right-handed alpha
Helix 30
AD3
A
547 553Right-handed alpha
Helix 31
AD4
B
15 20Right-handed alpha
Helix 32
AD5
B
21 23Right-handed 310
Helix 33
AD6
B
24 29Right-handed alpha
Helix 34
AD7
B
33 51Right-handed alpha
Helix 35
AD8
B
55 60Right-handed alpha
Helix 36
AD9
B
61 67Right-handed alpha
Helix 37
AE1
B
74 80Right-handed alpha
Helix 38
AE2
B
81 83Right-handed 310
Helix 39
AE3
B
84 103Right-handed alpha
Helix 40
AE4
B
105 118Right-handed alpha
Helix 41
AE5
B
120 137Right-handed alpha
Helix 42
AE6
B
141 158Right-handed alpha
Helix 43
AE7
B
202 220Right-handed alpha
Helix 44
AE8
B
221 223Right-handed 310
Helix 45
AE9
B
227 241Right-handed alpha
Helix 46
AF1
B
249 276Right-handed alpha
Helix 47
AF2
B
292 297Right-handed alpha
Helix 48
AF3
B
298 310Right-handed alpha
Helix 49
AF4
B
313 333Right-handed alpha
Helix 50
AF5
B
355 367Right-handed alpha
Helix 51
AF6
B
398 405Right-handed alpha
Helix 52
AF7
B
407 428Right-handed alpha
Helix 53
AF8
B
428 437Right-handed alpha
Helix 54
AF9
B
438 443Right-handed 310
Helix 55
AG1
B
444 460Right-handed alpha
Helix 56
AG2
B
464 483Right-handed alpha
Helix 57
AG3
B
487 499Right-handed alpha
Helix 58
AG4
B
508 516Right-handed alpha
Helix 59
AG5
B
521 547Right-handed alpha
Helix 60
AG6
B
547 553Right-handed alpha
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There are no sheets in PDB entry 7JSK
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