Analysis of interatomic Contacts of Structural Units in PDB entry:
7JSN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JSN entry

There are 6 chains in PDB entry 7JSN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8LYS 827
B
 ALA 19ASP 824
E
 ALA 27GLU 342
F
 ALA 27GLU 342
C
 ILE 10GLU 80
D
 ILE 10GLU 80
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 99 helices in PDB entry 7JSN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
4
A
56 68Right-handed alpha
Helix 2
5
A
76 88Right-handed alpha
Helix 3
6
A
128 130Right-handed 310
Helix 4
7
A
140 147Right-handed alpha
Helix 5
8
A
156 158Right-handed 310
Helix 6
9
A
166 170Right-handed alpha
Helix 7
10
A
205 222Right-handed alpha
Helix 8
11
A
227 249Right-handed alpha
Helix 9
12
A
257 265Right-handed alpha
Helix 10
13
A
346 352Right-handed alpha
Helix 11
14
A
414 430Right-handed alpha
Helix 12
15
A
435 458Right-handed alpha
Helix 13
16
A
486 494Right-handed alpha
Helix 14
17
A
498 501Right-handed alpha
Helix 15
18
A
517 528Right-handed alpha
Helix 16
19
A
532 535Right-handed alpha
Helix 17
20
A
539 552Right-handed alpha
Helix 18
21
A
561 576Right-handed alpha
Helix 19
22
A
581 583Right-handed 310
Helix 20
23
A
586 597Right-handed alpha
Helix 21
24
A
608 613Right-handed alpha
Helix 22
25
A
617 621Right-handed alpha
Helix 23
26
A
626 639Right-handed alpha
Helix 24
27
A
652 668Right-handed alpha
Helix 25
28
A
675 690Right-handed alpha
Helix 26
29
A
698 702Right-handed alpha
Helix 27
30
A
706 720Right-handed alpha
Helix 28
31
A
722 724Right-handed 310
Helix 29
32
A
728 752Right-handed alpha
Helix 30
33
A
763 791Right-handed 310
Helix 31
34
A
793 821Right-handed 310
Helix 32
38
B
75 86Right-handed alpha
Helix 33
39
B
119 122Right-handed alpha
Helix 34
40
B
126 128Right-handed 310
Helix 35
41
B
137 145Right-handed alpha
Helix 36
42
B
163 166Right-handed alpha
Helix 37
43
B
205 227Right-handed alpha
Helix 38
44
B
236 247Right-handed alpha
Helix 39
45
B
255 264Right-handed alpha
Helix 40
46
B
288 291Right-handed alpha
Helix 41
47
B
344 348Right-handed alpha
Helix 42
48
B
413 455Right-handed alpha
Helix 43
49
B
464 468Right-handed alpha
Helix 44
50
B
484 491Right-handed alpha
Helix 45
51
B
515 526Right-handed alpha
Helix 46
52
B
530 533Right-handed alpha
Helix 47
53
B
537 550Right-handed alpha
Helix 48
54
B
559 574Right-handed alpha
Helix 49
55
B
579 581Right-handed 310
Helix 50
56
B
584 594Right-handed alpha
Helix 51
57
B
606 612Right-handed alpha
Helix 52
58
B
629 638Right-handed alpha
Helix 53
59
B
650 666Right-handed alpha
Helix 54
60
B
670 673Right-handed alpha
Helix 55
61
B
676 688Right-handed alpha
Helix 56
62
B
695 700Right-handed alpha
Helix 57
63
B
706 718Right-handed alpha
Helix 58
64
B
720 723Right-handed 310
Helix 59
65
B
726 750Right-handed alpha
Helix 60
66
B
761 763Right-handed 310
Helix 61
67
B
765 778Right-handed 310
Helix 62
68
B
781 789Right-handed alpha
Helix 63
69
B
794 821Right-handed alpha
Helix 64
70
C
69 73Right-handed 310
Helix 65
71
C
78 80Right-handed alpha
Helix 66
72
D
69 73Right-handed 310
Helix 67
73
D
78 80Right-handed alpha
Helix 68
74
E
42 53Right-handed alpha
Helix 69
75
E
59 87Right-handed alpha
Helix 70
76
E
94 107Right-handed 310
Helix 71
77
E
117 128Right-handed alpha
Helix 72
78
E
132 141Right-handed alpha
Helix 73
79
E
146 159Right-handed 310
Helix 74
80
E
167 171Right-handed alpha
Helix 75
81
E
201 210Right-handed alpha
Helix 76
82
E
223 227Right-handed 310
Helix 77
83
E
238 250Right-handed alpha
Helix 78
84
E
267 276Right-handed alpha
Helix 79
85
E
279 281Right-handed 310
Helix 80
86
E
292 306Right-handed alpha
Helix 81
87
E
308 311Right-handed 310
Helix 82
88
E
325 341Right-handed alpha
Helix 83
89
F
42 53Right-handed alpha
Helix 84
90
F
59 87Right-handed alpha
Helix 85
91
F
94 107Right-handed 310
Helix 86
92
F
117 128Right-handed alpha
Helix 87
93
F
132 141Right-handed alpha
Helix 88
94
F
146 159Right-handed 310
Helix 89
95
F
167 171Right-handed alpha
Helix 90
96
F
201 210Right-handed alpha
Helix 91
97
F
223 227Right-handed 310
Helix 92
98
F
238 250Right-handed alpha
Helix 93
99
F
267 276Right-handed alpha
Helix 94
100
F
279 281Right-handed 310
Helix 95
101
F
292 306Right-handed alpha
Helix 96
102
F
308 311Right-handed 310
Helix 97
103
F
325 341Right-handed alpha
Helix 98
104
A
18 39Right-handed alpha
Helix 99
105
B
47 67Right-handed alpha
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There are 7 sheets in PDB entry 7JSN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
93 97anti-parallel
Strand 3
A
187 195anti-parallel
Strand 4
A
177 184anti-parallel
Strand 5
A
151 153anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
105 107anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 279first strand
Strand 2
A
399 403anti-parallel
Strand 3
A
387 390anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 107first strand
Strand 2
B
92 98anti-parallel
Strand 3
B
185 193anti-parallel
Strand 4
B
175 182anti-parallel
Strand 5
B
149 151anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 277first strand
Strand 2
B
397 401anti-parallel
Strand 3
B
385 388anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
317 320first strand
Strand 2
E
259 265parallel
Strand 3
E
216 222parallel
Strand 4
E
28 36parallel
Strand 5
E
190 197parallel
Strand 6
E
180 186anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
317 320first strand
Strand 2
F
259 265parallel
Strand 3
F
216 222parallel
Strand 4
F
28 36parallel
Strand 5
F
190 197parallel
Strand 6
F
180 186anti-parallel
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