Analysis of interatomic Contacts of Structural Units in PDB entry:
7JSR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JSR entry

There are 2 chains in PDB entry 7JSR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MSE 1	SER 1588
B	MSE 1	SER 1588

There are142 helices in PDB entry 7JSR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	11	Right-handed alpha
Helix 2	AA2	A	33	38	Right-handed alpha
Helix 3	AA3	A	39	50	Right-handed alpha
Helix 4	AA4	A	82	93	Right-handed alpha
Helix 5	AA5	A	145	186	Right-handed alpha
Helix 6	AA6	A	196	209	Right-handed alpha
Helix 7	AA7	A	238	240	Right-handed 310
Helix 8	AA8	A	296	301	Right-handed alpha
Helix 9	AA9	A	307	324	Right-handed alpha
Helix 10	AB1	A	328	338	Right-handed alpha
Helix 11	AB2	A	341	346	Right-handed 310
Helix 12	AB3	A	348	357	Right-handed alpha
Helix 13	AB4	A	390	392	Right-handed 310
Helix 14	AB5	A	393	409	Right-handed alpha
Helix 15	AB6	A	445	461	Right-handed alpha
Helix 16	AB7	A	462	471	Right-handed alpha
Helix 17	AB8	A	477	488	Right-handed alpha
Helix 18	AB9	A	489	495	Right-handed alpha
Helix 19	AC1	A	499	510	Right-handed alpha
Helix 20	AC2	A	541	551	Right-handed alpha
Helix 21	AC3	A	590	610	Right-handed alpha
Helix 22	AC4	A	616	619	Right-handed 310
Helix 23	AC5	A	620	626	Right-handed alpha
Helix 24	AC6	A	628	646	Right-handed alpha
Helix 25	AC7	A	650	661	Right-handed alpha
Helix 26	AC8	A	661	677	Right-handed alpha
Helix 27	AC9	A	677	682	Right-handed alpha
Helix 28	AD1	A	687	702	Right-handed alpha
Helix 29	AD2	A	704	720	Right-handed alpha
Helix 30	AD3	A	746	749	Right-handed 310
Helix 31	AD4	A	791	807	Right-handed alpha
Helix 32	AD5	A	830	857	Right-handed alpha
Helix 33	AD6	A	894	905	Right-handed alpha
Helix 34	AD7	A	909	913	Right-handed 310
Helix 35	AD8	A	922	927	Right-handed alpha
Helix 36	AD9	A	927	944	Right-handed alpha
Helix 37	AE1	A	963	970	Right-handed alpha
Helix 38	AE2	A	995	1008	Right-handed alpha
Helix 39	AE3	A	1012	1016	Right-handed 310
Helix 40	AE4	A	1038	1046	Right-handed alpha
Helix 41	AE5	A	1055	1065	Right-handed alpha
Helix 42	AE6	A	1086	1091	Right-handed alpha
Helix 43	AE7	A	1103	1105	Right-handed 310
Helix 44	AE8	A	1119	1129	Right-handed alpha
Helix 45	AE9	A	1135	1140	Right-handed alpha
Helix 46	AF1	A	1140	1163	Right-handed alpha
Helix 47	AF2	A	1167	1178	Right-handed alpha
Helix 48	AF3	A	1178	1203	Right-handed alpha
Helix 49	AF4	A	1204	1206	Right-handed 310
Helix 50	AF5	A	1207	1222	Right-handed alpha
Helix 51	AF6	A	1233	1244	Right-handed alpha
Helix 52	AF7	A	1248	1269	Right-handed alpha
Helix 53	AF8	A	1275	1280	Right-handed alpha
Helix 54	AF9	A	1281	1286	Right-handed 310
Helix 55	AG1	A	1287	1294	Right-handed alpha
Helix 56	AG2	A	1295	1300	Right-handed alpha
Helix 57	AG3	A	1303	1321	Right-handed alpha
Helix 58	AG4	A	1323	1333	Right-handed alpha
Helix 59	AG5	A	1335	1351	Right-handed alpha
Helix 60	AG6	A	1351	1366	Right-handed alpha
Helix 61	AG7	A	1368	1394	Right-handed alpha
Helix 62	AG8	A	1399	1415	Right-handed alpha
Helix 63	AG9	A	1424	1439	Right-handed alpha
Helix 64	AH1	A	1443	1452	Right-handed alpha
Helix 65	AH2	A	1452	1469	Right-handed alpha
Helix 66	AH3	A	1472	1487	Right-handed alpha
Helix 67	AH4	A	1488	1498	Right-handed alpha
Helix 68	AH5	A	1503	1530	Right-handed alpha
Helix 69	AH6	A	1537	1547	Right-handed alpha
Helix 70	AH7	A	1550	1567	Right-handed alpha
Helix 71	AH8	A	1570	1583	Right-handed alpha
Helix 72	AH9	B	2	11	Right-handed alpha
Helix 73	AI1	B	33	38	Right-handed alpha
Helix 74	AI2	B	39	50	Right-handed alpha
Helix 75	AI3	B	82	93	Right-handed alpha
Helix 76	AI4	B	145	186	Right-handed alpha
Helix 77	AI5	B	196	209	Right-handed alpha
Helix 78	AI6	B	238	240	Right-handed 310
Helix 79	AI7	B	296	301	Right-handed alpha
Helix 80	AI8	B	307	324	Right-handed alpha
Helix 81	AI9	B	328	338	Right-handed alpha
Helix 82	AJ1	B	341	346	Right-handed 310
Helix 83	AJ2	B	348	361	Right-handed alpha
Helix 84	AJ3	B	390	392	Right-handed 310
Helix 85	AJ4	B	393	409	Right-handed alpha
Helix 86	AJ5	B	445	461	Right-handed alpha
Helix 87	AJ6	B	462	473	Right-handed alpha
Helix 88	AJ7	B	477	488	Right-handed alpha
Helix 89	AJ8	B	489	495	Right-handed alpha
Helix 90	AJ9	B	499	510	Right-handed alpha
Helix 91	AK1	B	541	551	Right-handed alpha
Helix 92	AK2	B	590	610	Right-handed alpha
Helix 93	AK3	B	616	619	Right-handed 310
Helix 94	AK4	B	620	626	Right-handed alpha
Helix 95	AK5	B	628	646	Right-handed alpha
Helix 96	AK6	B	650	661	Right-handed alpha
Helix 97	AK7	B	661	677	Right-handed alpha
Helix 98	AK8	B	677	682	Right-handed alpha
Helix 99	AK9	B	687	702	Right-handed alpha
Helix 100	AL1	B	704	720	Right-handed alpha
Helix 101	AL2	B	746	749	Right-handed 310
Helix 102	AL3	B	791	807	Right-handed alpha
Helix 103	AL4	B	830	857	Right-handed alpha
Helix 104	AL5	B	894	905	Right-handed alpha
Helix 105	AL6	B	909	913	Right-handed 310
Helix 106	AL7	B	922	927	Right-handed alpha
Helix 107	AL8	B	927	944	Right-handed alpha
Helix 108	AL9	B	963	970	Right-handed alpha
Helix 109	AM1	B	995	1008	Right-handed alpha
Helix 110	AM2	B	1012	1016	Right-handed 310
Helix 111	AM3	B	1038	1046	Right-handed alpha
Helix 112	AM4	B	1055	1064	Right-handed alpha
Helix 113	AM5	B	1086	1091	Right-handed alpha
Helix 114	AM6	B	1103	1105	Right-handed 310
Helix 115	AM7	B	1119	1129	Right-handed alpha
Helix 116	AM8	B	1135	1140	Right-handed alpha
Helix 117	AM9	B	1140	1163	Right-handed alpha
Helix 118	AN1	B	1167	1178	Right-handed alpha
Helix 119	AN2	B	1178	1203	Right-handed alpha
Helix 120	AN3	B	1204	1206	Right-handed 310
Helix 121	AN4	B	1207	1222	Right-handed alpha
Helix 122	AN5	B	1233	1244	Right-handed alpha
Helix 123	AN6	B	1248	1269	Right-handed alpha
Helix 124	AN7	B	1275	1280	Right-handed alpha
Helix 125	AN8	B	1281	1286	Right-handed 310
Helix 126	AN9	B	1287	1294	Right-handed alpha
Helix 127	AO1	B	1295	1300	Right-handed alpha
Helix 128	AO2	B	1303	1321	Right-handed alpha
Helix 129	AO3	B	1323	1333	Right-handed alpha
Helix 130	AO4	B	1335	1351	Right-handed alpha
Helix 131	AO5	B	1351	1366	Right-handed alpha
Helix 132	AO6	B	1368	1394	Right-handed alpha
Helix 133	AO7	B	1399	1415	Right-handed alpha
Helix 134	AO8	B	1424	1439	Right-handed alpha
Helix 135	AO9	B	1443	1452	Right-handed alpha
Helix 136	AP1	B	1452	1469	Right-handed alpha
Helix 137	AP2	B	1472	1487	Right-handed alpha
Helix 138	AP3	B	1488	1498	Right-handed alpha
Helix 139	AP4	B	1503	1530	Right-handed alpha
Helix 140	AP5	B	1537	1547	Right-handed alpha
Helix 141	AP6	B	1550	1567	Right-handed alpha
Helix 142	AP7	B	1570	1583	Right-handed alpha

There are 22 sheets in PDB entry 7JSR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	63	first strand
Strand 2	A	72	78	anti-parallel
Strand 3	A	131	139	anti-parallel
Strand 4	A	105	110	anti-parallel
Strand 5	A	116	120	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	229	first strand
Strand 2	A	213	223	anti-parallel
Strand 3	A	235	236	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	229	first strand
Strand 2	A	213	223	anti-parallel
Strand 3	A	285	294	anti-parallel
Strand 4	A	273	282	anti-parallel
Strand 5	A	255	259	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	369	371	first strand
Strand 2	A	380	388	anti-parallel
Strand 3	A	424	432	anti-parallel
Strand 4	A	412	418	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	522	first strand
Strand 2	A	529	536	anti-parallel
Strand 3	A	571	581	anti-parallel
Strand 4	A	554	565	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	721	724	first strand
Strand 2	A	740	744	anti-parallel
Strand 3	A	759	764	anti-parallel
Strand 4	A	768	774	anti-parallel
Strand 5	A	813	821	anti-parallel
Strand 6	A	779	780	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	721	724	first strand
Strand 2	A	740	744	anti-parallel
Strand 3	A	759	764	anti-parallel
Strand 4	A	768	774	anti-parallel
Strand 5	A	813	821	anti-parallel
Strand 6	A	783	785	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	859	860	first strand
Strand 2	A	867	868	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1026	1029	first strand
Strand 2	A	986	989	anti-parallel
Strand 3	A	976	982	anti-parallel
Strand 4	A	953	958	parallel
Strand 5	A	1070	1073	parallel
Strand 6	A	1109	1112	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1035	1036	first strand
Strand 2	A	1053	1054	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1080	1081	first strand
Strand 2	A	1100	1101	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	72	78	anti-parallel
Strand 3	B	131	139	anti-parallel
Strand 4	B	105	110	anti-parallel
Strand 5	B	116	120	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	229	first strand
Strand 2	B	213	223	anti-parallel
Strand 3	B	235	236	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	229	first strand
Strand 2	B	213	223	anti-parallel
Strand 3	B	285	294	anti-parallel
Strand 4	B	273	282	anti-parallel
Strand 5	B	255	259	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	371	first strand
Strand 2	B	380	388	anti-parallel
Strand 3	B	424	432	anti-parallel
Strand 4	B	413	418	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	515	522	first strand
Strand 2	B	529	536	anti-parallel
Strand 3	B	571	581	anti-parallel
Strand 4	B	554	565	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	721	724	first strand
Strand 2	B	740	744	anti-parallel
Strand 3	B	759	764	anti-parallel
Strand 4	B	768	774	anti-parallel
Strand 5	B	813	821	anti-parallel
Strand 6	B	779	780	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	721	724	first strand
Strand 2	B	740	744	anti-parallel
Strand 3	B	759	764	anti-parallel
Strand 4	B	768	774	anti-parallel
Strand 5	B	813	821	anti-parallel
Strand 6	B	783	785	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	859	860	first strand
Strand 2	B	867	868	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1026	1029	first strand
Strand 2	B	986	989	anti-parallel
Strand 3	B	976	982	anti-parallel
Strand 4	B	953	958	parallel
Strand 5	B	1070	1073	parallel
Strand 6	B	1109	1112	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1035	1036	first strand
Strand 2	B	1053	1054	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1080	1081	first strand
Strand 2	B	1100	1101	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JSR

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JSR