Analysis of interatomic Contacts of Structural Units in PDB entry:
7JTJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JTJ entry

There is 1 chain in PDB entry 7JTJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1483GLN 1910
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7JTJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1488 1492Right-handed 310
Helix 2
AA2
A
1499 1508Right-handed alpha
Helix 3
AA3
A
1532 1547Right-handed alpha
Helix 4
AA4
A
1548 1550Right-handed 310
Helix 5
AA5
A
1577 1590Right-handed alpha
Helix 6
AA6
A
1625 1642Right-handed alpha
Helix 7
AA7
A
1653 1659Right-handed alpha
Helix 8
AA8
A
1670 1677Right-handed alpha
Helix 9
AA9
A
1678 1681Right-handed 310
Helix 10
AB1
A
1692 1696Right-handed 310
Helix 11
AB2
A
1709 1723Right-handed alpha
Helix 12
AB3
A
1726 1743Right-handed alpha
Helix 13
AB4
A
1763 1767Right-handed 310
Helix 14
AB5
A
1784 1801Right-handed alpha
Helix 15
AB6
A
1806 1819Right-handed alpha
Helix 16
AB7
A
1881 1883Right-handed 310
Helix 17
AB8
A
1886 1905Right-handed alpha
Helix 18
AB9
A
1906 1910Right-handed 310
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There are 3 sheets in PDB entry 7JTJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1572 1575first strand
Strand 2
A
1601 1608parallel
Strand 3
A
1613 1620anti-parallel
Strand 4
A
1521 1528anti-parallel
Strand 5
A
1848 1854anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1552 1555first strand
Strand 2
A
1558 1561anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1701 1708first strand
Strand 2
A
1871 1879anti-parallel
Strand 3
A
1861 1868anti-parallel
Strand 4
A
1827 1831parallel
Strand 5
A
1748 1754parallel
Strand 6
A
1773 1779anti-parallel
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