Analysis of interatomic Contacts of Structural Units in PDB entry:
7JTU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JTU entry

There are 2 chains in PDB entry 7JTU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 258SER 408
B
 MSE 1VAL 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7JTU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
258 279Right-handed alpha
Helix 2
AA2
A
283 288Right-handed alpha
Helix 3
AA3
A
314 326Right-handed alpha
Helix 4
AA4
A
341 345Right-handed 310
Helix 5
AA5
A
346 355Right-handed alpha
Helix 6
AA6
A
367 375Right-handed alpha
Helix 7
AA7
A
376 382Right-handed alpha
Helix 8
AA8
B
2 19Right-handed alpha
Helix 9
AA9
B
25 38Right-handed alpha
Helix 10
AB1
B
41 59Right-handed alpha
Helix 11
AB2
B
60 69Right-handed alpha
Helix 12
AB3
B
71 86Right-handed alpha
Helix 13
AB4
B
90 107Right-handed alpha
Helix 14
AB5
B
112 114Right-handed 310
Helix 15
AB6
B
115 134Right-handed alpha
Helix 16
AB7
B
145 149Right-handed 310
Helix 17
AB8
B
150 154Right-handed 310
Helix 18
AB9
B
155 166Right-handed alpha
Helix 19
AC1
B
173 187Right-handed alpha
Helix 20
AC2
B
187 193Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7JTU.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
291 293anti-parallel
Strand 3
A
360 362anti-parallel
Strand 4
A
385 388parallel
Strand 5
A
392 396anti-parallel
Strand 6
A
402 406anti-parallel
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