Analysis of interatomic Contacts of Structural Units in PDB entry:
7JV7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JV7 entry

There are 3 chains in PDB entry 7JV7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 170LEU 480
B
 PHE 5SER 314
C
 GLU 5ILE 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 7JV7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
224 235Right-handed alpha
Helix 2
AA2
A
267 272Right-handed alpha
Helix 3
AA3
A
279 300Right-handed alpha
Helix 4
AA4
A
308 310Right-handed 310
Helix 5
AA5
A
343 347Right-handed 310
Helix 6
AA6
A
348 353Right-handed alpha
Helix 7
AA7
A
360 377Right-handed alpha
Helix 8
AA8
A
385 398Right-handed alpha
Helix 9
AA9
A
407 411Right-handed 310
Helix 10
AB1
A
413 418Right-handed alpha
Helix 11
AB2
A
428 433Right-handed alpha
Helix 12
AB3
A
439 450Right-handed alpha
Helix 13
AB4
A
459 465Right-handed alpha
Helix 14
AB5
A
466 471Right-handed alpha
Helix 15
AB6
B
17 26Right-handed alpha
Helix 16
AB7
B
31 54Right-handed alpha
Helix 17
AB8
B
56 74Right-handed alpha
Helix 18
AB9
B
80 96Right-handed alpha
Helix 19
AC1
B
101 114Right-handed alpha
Helix 20
AC2
B
119 141Right-handed alpha
Helix 21
AC3
B
152 164Right-handed alpha
Helix 22
AC4
B
167 182Right-handed alpha
Helix 23
AC5
B
183 184Right-handed 310
Helix 24
AC6
B
185 189Right-handed 310
Helix 25
AC7
B
191 207Right-handed alpha
Helix 26
AC8
B
213 221Right-handed 310
Helix 27
AC9
B
223 241Right-handed alpha
Helix 28
AD1
B
242 245Right-handed 310
Helix 29
AD2
B
246 250Right-handed 310
Helix 30
AD3
B
259 270Right-handed alpha
Helix 31
AD4
B
280 286Right-handed alpha
Helix 32
AD5
B
287 292Right-handed alpha
Helix 33
AD6
B
306 314Right-handed alpha
Helix 34
AD7
C
6 16Right-handed alpha
Helix 35
AD8
C
16 21Right-handed alpha
Helix 36
AD9
C
48 73Right-handed alpha
Helix 37
AE1
C
74 93Right-handed alpha
Helix 38
AE2
C
104 109Right-handed alpha
Helix 39
AE3
C
113 122Right-handed alpha
Helix 40
AE4
C
127 131Right-handed 310
Helix 41
AE5
C
132 147Right-handed alpha
Helix 42
AE6
C
151 156Right-handed alpha
Helix 43
AE7
C
180 207Right-handed alpha
Helix 44
AE8
C
223 244Right-handed alpha
Helix 45
AE9
C
257 271Right-handed alpha
Helix 46
AF1
C
276 295Right-handed alpha
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There are 3 sheets in PDB entry 7JV7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 177first strand
Strand 2
B
6 11anti-parallel
Strand 3
B
300 304parallel
Strand 4
A
247 251anti-parallel
Strand 5
A
255 261anti-parallel
Strand 6
A
208 214anti-parallel
Strand 7
A
197 202anti-parallel
Strand 8
A
183 190anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 266first strand
Strand 2
A
312 314anti-parallel
Strand 3
A
320 322anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 303first strand
Strand 2
A
329 330anti-parallel
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