Analysis of interatomic Contacts of Structural Units in PDB entry:
7JW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JW2 entry

There are 2 chains in PDB entry 7JW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 427ASP 645
B
 ALA 427ASN 644
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7JW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
433 435Right-handed 310
Helix 2
AA2
A
442 454Right-handed alpha
Helix 3
AA3
A
491 495Right-handed alpha
Helix 4
AA4
A
497 508Right-handed alpha
Helix 5
AA5
A
521 532Right-handed alpha
Helix 6
AA6
A
550 558Right-handed alpha
Helix 7
AA7
A
575 585Right-handed alpha
Helix 8
AA8
A
603 631Right-handed alpha
Helix 9
AA9
A
634 643Right-handed alpha
Helix 10
AB1
B
433 435Right-handed 310
Helix 11
AB2
B
442 454Right-handed alpha
Helix 12
AB3
B
491 495Right-handed alpha
Helix 13
AB4
B
497 508Right-handed alpha
Helix 14
AB5
B
520 532Right-handed alpha
Helix 15
AB6
B
550 558Right-handed alpha
Helix 16
AB7
B
575 585Right-handed alpha
Helix 17
AB8
B
603 631Right-handed alpha
Helix 18
AB9
B
634 643Right-handed alpha
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There are 2 sheets in PDB entry 7JW2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 440first strand
Strand 2
A
486 490parallel
Strand 3
A
475 481anti-parallel
Strand 4
A
458 465anti-parallel
Strand 5
A
515 518parallel
Strand 6
A
547 549parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
437 440first strand
Strand 2
B
486 490parallel
Strand 3
B
475 481anti-parallel
Strand 4
B
458 465anti-parallel
Strand 5
B
515 518parallel
Strand 6
B
547 549parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il