Analysis of interatomic Contacts of Structural Units in PDB entry:
7JXH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JXH entry

There are 5 chains in PDB entry 7JXH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 707	PRO 996
A	MET 706	GLU 992
C	PRO 707	GLU 992
D	PRO 707	GLU 992
E	GLN 709	LYS 854

There are117 helices in PDB entry 7JXH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	716	718	Right-handed 310
Helix 2	AA2	B	759	774	Right-handed alpha
Helix 3	AA3	B	805	813	Right-handed alpha
Helix 4	AA4	B	818	839	Right-handed alpha
Helix 5	AA5	B	847	849	Right-handed 310
Helix 6	AA6	B	885	889	Right-handed 310
Helix 7	AA7	B	890	896	Right-handed alpha
Helix 8	AA8	B	900	917	Right-handed alpha
Helix 9	AA9	B	927	929	Right-handed 310
Helix 10	AB1	B	930	937	Right-handed alpha
Helix 11	AB2	B	948	959	Right-handed alpha
Helix 12	AB3	B	962	966	Right-handed 310
Helix 13	AB4	B	968	982	Right-handed alpha
Helix 14	AB5	B	983	986	Right-handed 310
Helix 15	AB6	A	716	718	Right-handed 310
Helix 16	AB7	A	760	772	Right-handed alpha
Helix 17	AB8	A	805	813	Right-handed alpha
Helix 18	AB9	A	818	839	Right-handed alpha
Helix 19	AC1	A	847	849	Right-handed 310
Helix 20	AC2	A	885	889	Right-handed 310
Helix 21	AC3	A	890	896	Right-handed alpha
Helix 22	AC4	A	900	917	Right-handed alpha
Helix 23	AC5	A	927	929	Right-handed 310
Helix 24	AC6	A	930	937	Right-handed alpha
Helix 25	AC7	A	948	959	Right-handed alpha
Helix 26	AC8	A	962	966	Right-handed 310
Helix 27	AC9	A	968	982	Right-handed alpha
Helix 28	AD1	A	983	986	Right-handed 310
Helix 29	AD2	C	716	718	Right-handed 310
Helix 30	AD3	C	761	774	Right-handed alpha
Helix 31	AD4	C	805	813	Right-handed alpha
Helix 32	AD5	C	818	839	Right-handed alpha
Helix 33	AD6	C	847	849	Right-handed 310
Helix 34	AD7	C	885	889	Right-handed 310
Helix 35	AD8	C	890	897	Right-handed alpha
Helix 36	AD9	C	900	917	Right-handed alpha
Helix 37	AE1	C	927	929	Right-handed 310
Helix 38	AE2	C	930	937	Right-handed alpha
Helix 39	AE3	C	948	959	Right-handed alpha
Helix 40	AE4	C	962	966	Right-handed 310
Helix 41	AE5	C	968	982	Right-handed alpha
Helix 42	AE6	C	983	986	Right-handed 310
Helix 43	AE7	C	988	992	Right-handed 310
Helix 44	AE8	D	716	718	Right-handed 310
Helix 45	AE9	D	760	774	Right-handed alpha
Helix 46	AF1	D	805	813	Right-handed alpha
Helix 47	AF2	D	818	839	Right-handed alpha
Helix 48	AF3	D	847	849	Right-handed 310
Helix 49	AF4	D	885	889	Right-handed 310
Helix 50	AF5	D	890	897	Right-handed alpha
Helix 51	AF6	D	900	917	Right-handed alpha
Helix 52	AF7	D	927	929	Right-handed 310
Helix 53	AF8	D	930	937	Right-handed alpha
Helix 54	AF9	D	948	959	Right-handed alpha
Helix 55	AG1	D	962	966	Right-handed 310
Helix 56	AG2	D	968	982	Right-handed alpha
Helix 57	AG3	D	983	986	Right-handed 310
Helix 58	AG4	E	716	718	Right-handed 310
Helix 59	AG5	E	760	772	Right-handed alpha
Helix 60	AG6	E	805	813	Right-handed alpha
Helix 61	AG7	E	818	839	Right-handed alpha
Helix 62	AG8	E	847	849	Right-handed 310
Helix 63	AG9	E	885	889	Right-handed 310
Helix 64	AH1	E	890	896	Right-handed alpha
Helix 65	AH2	E	900	917	Right-handed alpha
Helix 66	AH3	E	927	929	Right-handed 310
Helix 67	AH4	E	930	937	Right-handed alpha
Helix 68	AH5	E	948	959	Right-handed alpha
Helix 69	AH6	E	962	966	Right-handed 310
Helix 70	AH7	E	968	982	Right-handed alpha
Helix 71	AH8	E	982	987	Right-handed alpha
Helix 72	AH9	E	988	992	Right-handed 310
Helix 73	AI1	F	716	718	Right-handed 310
Helix 74	AI2	F	760	774	Right-handed alpha
Helix 75	AI3	F	805	813	Right-handed alpha
Helix 76	AI4	F	818	839	Right-handed alpha
Helix 77	AI5	F	847	849	Right-handed 310
Helix 78	AI6	F	885	889	Right-handed 310
Helix 79	AI7	F	890	896	Right-handed alpha
Helix 80	AI8	F	900	917	Right-handed alpha
Helix 81	AI9	F	927	929	Right-handed 310
Helix 82	AJ1	F	930	937	Right-handed alpha
Helix 83	AJ2	F	948	959	Right-handed alpha
Helix 84	AJ3	F	962	966	Right-handed 310
Helix 85	AJ4	F	968	982	Right-handed alpha
Helix 86	AJ5	F	983	986	Right-handed 310
Helix 87	AJ6	G	716	718	Right-handed 310
Helix 88	AJ7	G	761	764	Right-handed 310
Helix 89	AJ8	G	765	774	Right-handed alpha
Helix 90	AJ9	G	805	813	Right-handed alpha
Helix 91	AK1	G	818	839	Right-handed alpha
Helix 92	AK2	G	847	849	Right-handed 310
Helix 93	AK3	G	885	889	Right-handed 310
Helix 94	AK4	G	890	897	Right-handed alpha
Helix 95	AK5	G	900	917	Right-handed alpha
Helix 96	AK6	G	927	929	Right-handed 310
Helix 97	AK7	G	930	937	Right-handed alpha
Helix 98	AK8	G	948	959	Right-handed alpha
Helix 99	AK9	G	962	966	Right-handed 310
Helix 100	AL1	G	968	982	Right-handed alpha
Helix 101	AL2	G	983	986	Right-handed 310
Helix 102	AL3	G	988	992	Right-handed 310
Helix 103	AL4	H	716	718	Right-handed 310
Helix 104	AL5	H	764	774	Right-handed alpha
Helix 105	AL6	H	805	813	Right-handed alpha
Helix 106	AL7	H	818	839	Right-handed alpha
Helix 107	AL8	H	847	849	Right-handed 310
Helix 108	AL9	H	885	889	Right-handed 310
Helix 109	AM1	H	890	897	Right-handed alpha
Helix 110	AM2	H	900	917	Right-handed alpha
Helix 111	AM3	H	927	929	Right-handed 310
Helix 112	AM4	H	930	937	Right-handed alpha
Helix 113	AM5	H	948	959	Right-handed alpha
Helix 114	AM6	H	962	966	Right-handed 310
Helix 115	AM7	H	968	982	Right-handed alpha
Helix 116	AM8	H	983	986	Right-handed 310
Helix 117	AM9	H	988	992	Right-handed 310

There are 20 sheets in PDB entry 7JXH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	714	first strand
Strand 2	B	785	789	parallel
Strand 3	B	795	799	anti-parallel
Strand 4	B	748	754	anti-parallel
Strand 5	B	733	739	anti-parallel
Strand 6	B	720	728	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	851	855	first strand
Strand 2	B	858	861	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	714	first strand
Strand 2	A	785	789	parallel
Strand 3	A	795	799	anti-parallel
Strand 4	A	748	755	anti-parallel
Strand 5	A	732	739	anti-parallel
Strand 6	A	720	728	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	851	855	first strand
Strand 2	A	858	861	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	714	first strand
Strand 2	C	785	789	parallel
Strand 3	C	795	799	anti-parallel
Strand 4	C	748	755	anti-parallel
Strand 5	C	732	739	anti-parallel
Strand 6	C	720	729	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	851	855	first strand
Strand 2	C	858	861	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	713	714	first strand
Strand 2	D	785	789	parallel
Strand 3	D	795	799	anti-parallel
Strand 4	D	748	755	anti-parallel
Strand 5	D	732	739	anti-parallel
Strand 6	D	720	729	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	841	842	first strand
Strand 2	D	868	869	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	851	855	first strand
Strand 2	D	858	861	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	877	878	first strand
Strand 2	D	898	899	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	713	714	first strand
Strand 2	E	785	789	parallel
Strand 3	E	795	799	anti-parallel
Strand 4	E	748	754	anti-parallel
Strand 5	E	732	739	anti-parallel
Strand 6	E	720	729	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	851	855	first strand
Strand 2	E	858	861	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	720	727	first strand
Strand 2	F	733	739	anti-parallel
Strand 3	F	748	754	anti-parallel
Strand 4	F	795	799	anti-parallel
Strand 5	F	785	789	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	851	855	first strand
Strand 2	F	858	861	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	713	714	first strand
Strand 2	G	787	789	parallel
Strand 3	G	795	799	anti-parallel
Strand 4	G	748	755	anti-parallel
Strand 5	G	732	739	anti-parallel
Strand 6	G	720	728	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	851	855	first strand
Strand 2	G	858	861	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	713	714	first strand
Strand 2	H	785	789	parallel
Strand 3	H	795	799	anti-parallel
Strand 4	H	748	754	anti-parallel
Strand 5	H	732	739	anti-parallel
Strand 6	H	720	729	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	841	842	first strand
Strand 2	H	868	869	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	851	855	first strand
Strand 2	H	858	861	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	877	878	first strand
Strand 2	H	898	899	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JXH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JXH