Analysis of interatomic Contacts of Structural Units in PDB entry:
7JXX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7JXX entry

There is 1 chain in PDB entry 7JXX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 22LYS 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 7JXX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 84Right-handed alpha
Helix 2
AA2
A
113 121Right-handed alpha
Helix 3
AA3
A
127 148Right-handed alpha
Helix 4
AA4
A
156 158Right-handed 310
Helix 5
AA5
A
202 206Right-handed 310
Helix 6
AA6
A
207 212Right-handed alpha
Helix 7
AA7
A
217 235Right-handed alpha
Helix 8
AA8
A
244 255Right-handed alpha
Helix 9
AA9
A
256 262Right-handed 310
Helix 10
AB1
A
267 278Right-handed alpha
Helix 11
AB2
A
285 300Right-handed alpha
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There are 3 sheets in PDB entry 7JXX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
34 42anti-parallel
Strand 3
A
47 53anti-parallel
Strand 4
A
59 66anti-parallel
Strand 5
A
102 108anti-parallel
Strand 6
A
93 98anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
181 182anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 162first strand
Strand 2
A
172 174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il