Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZ2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JZ2 entry

There are 12 chains in PDB entry 7JZ2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 588
B	MET 1	ALA 238
C	VAL 5	TRP 129
D	SER 3	VAL 115
E	MET 1	TYR 588
F	MET 1	ALA 238
G	VAL 5	TRP 129
H	SER 3	VAL 115
I	MET 1	TYR 588
J	MET 1	ALA 238
K	VAL 5	TRP 129
L	SER 3	VAL 115

There are 96 helices in PDB entry 7JZ2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	29	Right-handed alpha
Helix 2	AA2	A	44	49	Right-handed 310
Helix 3	AA3	A	64	76	Right-handed alpha
Helix 4	AA4	A	81	103	Right-handed alpha
Helix 5	AA5	A	140	157	Right-handed alpha
Helix 6	AA6	A	205	209	Right-handed 310
Helix 7	AA7	A	220	230	Right-handed alpha
Helix 8	AA8	A	402	418	Right-handed alpha
Helix 9	AA9	A	418	427	Right-handed alpha
Helix 10	AB1	A	433	450	Right-handed alpha
Helix 11	AB2	A	455	471	Right-handed alpha
Helix 12	AB3	A	476	495	Right-handed alpha
Helix 13	AB4	A	507	533	Right-handed alpha
Helix 14	AB5	B	34	44	Right-handed alpha
Helix 15	AB6	B	75	77	Right-handed 310
Helix 16	AB7	B	78	83	Right-handed alpha
Helix 17	AB8	B	107	117	Right-handed alpha
Helix 18	AB9	B	136	142	Right-handed alpha
Helix 19	AC1	B	155	158	Right-handed 310
Helix 20	AC2	B	159	165	Right-handed alpha
Helix 21	AC3	B	171	184	Right-handed alpha
Helix 22	AC4	B	189	197	Right-handed alpha
Helix 23	AC5	B	211	216	Right-handed alpha
Helix 24	AC6	B	221	238	Right-handed alpha
Helix 25	AC7	C	21	54	Right-handed alpha
Helix 26	AC8	C	54	66	Right-handed alpha
Helix 27	AC9	C	67	97	Right-handed alpha
Helix 28	AD1	C	102	129	Right-handed alpha
Helix 29	AD2	D	11	40	Right-handed alpha
Helix 30	AD3	D	44	52	Right-handed alpha
Helix 31	AD4	D	54	84	Right-handed alpha
Helix 32	AD5	D	86	113	Right-handed alpha
Helix 33	AD6	E	16	29	Right-handed alpha
Helix 34	AD7	E	44	49	Right-handed 310
Helix 35	AD8	E	64	76	Right-handed alpha
Helix 36	AD9	E	81	103	Right-handed alpha
Helix 37	AE1	E	140	157	Right-handed alpha
Helix 38	AE2	E	205	209	Right-handed 310
Helix 39	AE3	E	220	230	Right-handed alpha
Helix 40	AE4	E	402	418	Right-handed alpha
Helix 41	AE5	E	418	427	Right-handed alpha
Helix 42	AE6	E	433	450	Right-handed alpha
Helix 43	AE7	E	455	471	Right-handed alpha
Helix 44	AE8	E	476	495	Right-handed alpha
Helix 45	AE9	E	507	533	Right-handed alpha
Helix 46	AF1	F	34	44	Right-handed alpha
Helix 47	AF2	F	75	77	Right-handed 310
Helix 48	AF3	F	78	83	Right-handed alpha
Helix 49	AF4	F	107	117	Right-handed alpha
Helix 50	AF5	F	136	142	Right-handed alpha
Helix 51	AF6	F	155	158	Right-handed 310
Helix 52	AF7	F	159	165	Right-handed alpha
Helix 53	AF8	F	171	184	Right-handed alpha
Helix 54	AF9	F	189	197	Right-handed alpha
Helix 55	AG1	F	211	216	Right-handed alpha
Helix 56	AG2	F	221	238	Right-handed alpha
Helix 57	AG3	G	21	54	Right-handed alpha
Helix 58	AG4	G	54	66	Right-handed alpha
Helix 59	AG5	G	67	97	Right-handed alpha
Helix 60	AG6	G	102	129	Right-handed alpha
Helix 61	AG7	H	11	40	Right-handed alpha
Helix 62	AG8	H	44	52	Right-handed alpha
Helix 63	AG9	H	54	84	Right-handed alpha
Helix 64	AH1	H	86	113	Right-handed alpha
Helix 65	AH2	I	16	29	Right-handed alpha
Helix 66	AH3	I	44	49	Right-handed 310
Helix 67	AH4	I	64	76	Right-handed alpha
Helix 68	AH5	I	81	103	Right-handed alpha
Helix 69	AH6	I	140	157	Right-handed alpha
Helix 70	AH7	I	205	209	Right-handed 310
Helix 71	AH8	I	220	230	Right-handed alpha
Helix 72	AH9	I	402	418	Right-handed alpha
Helix 73	AI1	I	418	427	Right-handed alpha
Helix 74	AI2	I	433	450	Right-handed alpha
Helix 75	AI3	I	455	471	Right-handed alpha
Helix 76	AI4	I	476	495	Right-handed alpha
Helix 77	AI5	I	507	533	Right-handed alpha
Helix 78	AI6	J	34	44	Right-handed alpha
Helix 79	AI7	J	75	77	Right-handed 310
Helix 80	AI8	J	78	83	Right-handed alpha
Helix 81	AI9	J	107	117	Right-handed alpha
Helix 82	AJ1	J	136	142	Right-handed alpha
Helix 83	AJ2	J	155	158	Right-handed 310
Helix 84	AJ3	J	159	165	Right-handed alpha
Helix 85	AJ4	J	171	184	Right-handed alpha
Helix 86	AJ5	J	189	197	Right-handed alpha
Helix 87	AJ6	J	211	216	Right-handed alpha
Helix 88	AJ7	J	221	238	Right-handed alpha
Helix 89	AJ8	K	21	54	Right-handed alpha
Helix 90	AJ9	K	54	66	Right-handed alpha
Helix 91	AK1	K	67	97	Right-handed alpha
Helix 92	AK2	K	102	129	Right-handed alpha
Helix 93	AK3	L	11	40	Right-handed alpha
Helix 94	AK4	L	44	52	Right-handed alpha
Helix 95	AK5	L	54	84	Right-handed alpha
Helix 96	AK6	L	86	113	Right-handed alpha

There are 24 sheets in PDB entry 7JZ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	7	first strand
Strand 2	A	190	194	parallel
Strand 3	A	177	184	anti-parallel
Strand 4	A	164	171	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	161	first strand
Strand 2	A	33	36	parallel
Strand 3	A	10	13	parallel
Strand 4	A	198	200	parallel
Strand 5	A	377	385	parallel
Strand 6	A	367	371	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	134	135	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	234	first strand
Strand 2	A	556	560	anti-parallel
Strand 3	A	565	569	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	242	first strand
Strand 2	A	352	356	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	361	first strand
Strand 2	A	390	391	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	536	537	first strand
Strand 2	A	540	541	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	25	first strand
Strand 2	B	3	9	anti-parallel
Strand 3	B	89	92	parallel
Strand 4	B	64	67	anti-parallel
Strand 5	B	70	73	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	7	first strand
Strand 2	E	190	194	parallel
Strand 3	E	177	184	anti-parallel
Strand 4	E	164	171	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	161	first strand
Strand 2	E	33	36	parallel
Strand 3	E	10	13	parallel
Strand 4	E	198	200	parallel
Strand 5	E	377	385	parallel
Strand 6	E	367	371	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	54	first strand
Strand 2	E	134	135	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	233	234	first strand
Strand 2	E	556	560	anti-parallel
Strand 3	E	565	569	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	239	242	first strand
Strand 2	E	352	356	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	360	361	first strand
Strand 2	E	390	391	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	536	537	first strand
Strand 2	E	540	541	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	25	first strand
Strand 2	F	3	9	anti-parallel
Strand 3	F	89	92	parallel
Strand 4	F	64	67	anti-parallel
Strand 5	F	70	73	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	5	7	first strand
Strand 2	I	190	194	parallel
Strand 3	I	177	184	anti-parallel
Strand 4	I	164	171	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	159	161	first strand
Strand 2	I	33	36	parallel
Strand 3	I	10	13	parallel
Strand 4	I	198	200	parallel
Strand 5	I	377	385	parallel
Strand 6	I	367	371	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	54	first strand
Strand 2	I	134	135	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	233	234	first strand
Strand 2	I	556	560	anti-parallel
Strand 3	I	565	569	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	239	242	first strand
Strand 2	I	352	356	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	360	361	first strand
Strand 2	I	390	391	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	536	537	first strand
Strand 2	I	540	541	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	19	25	first strand
Strand 2	J	3	9	anti-parallel
Strand 3	J	89	92	parallel
Strand 4	J	64	67	anti-parallel
Strand 5	J	70	73	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JZ2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZ2