Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7JZH entry

There are 6 chains in PDB entry 7JZH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 5	GLN 459
B	GLN 5	GLN 459
C	GLN 5	GLN 459
D	GLN 5	GLN 459
E	GLN 5	GLN 459
F	GLN 5	GLN 459

There are 86 helices in PDB entry 7JZH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	14	Right-handed alpha
Helix 2	AA2	A	38	54	Right-handed alpha
Helix 3	AA3	A	69	79	Right-handed alpha
Helix 4	AA4	A	90	108	Right-handed alpha
Helix 5	AA5	A	125	149	Right-handed alpha
Helix 6	AA6	A	163	173	Right-handed alpha
Helix 7	AA7	A	190	197	Right-handed alpha
Helix 8	AA8	A	219	234	Right-handed alpha
Helix 9	AA9	A	246	249	Right-handed 310
Helix 10	AB1	A	250	255	Right-handed alpha
Helix 11	AB2	A	322	359	Right-handed alpha
Helix 12	AB3	A	391	401	Right-handed alpha
Helix 13	AB4	A	430	451	Right-handed alpha
Helix 14	AB5	B	6	14	Right-handed alpha
Helix 15	AB6	B	38	54	Right-handed alpha
Helix 16	AB7	B	55	59	Right-handed 310
Helix 17	AB8	B	69	79	Right-handed alpha
Helix 18	AB9	B	90	108	Right-handed alpha
Helix 19	AC1	B	125	149	Right-handed alpha
Helix 20	AC2	B	166	173	Right-handed alpha
Helix 21	AC3	B	190	197	Right-handed alpha
Helix 22	AC4	B	220	234	Right-handed alpha
Helix 23	AC5	B	246	249	Right-handed 310
Helix 24	AC6	B	250	255	Right-handed alpha
Helix 25	AC7	B	322	361	Right-handed alpha
Helix 26	AC8	B	391	401	Right-handed alpha
Helix 27	AC9	B	430	451	Right-handed alpha
Helix 28	AD1	C	6	14	Right-handed alpha
Helix 29	AD2	C	38	54	Right-handed alpha
Helix 30	AD3	C	55	59	Right-handed 310
Helix 31	AD4	C	69	79	Right-handed alpha
Helix 32	AD5	C	90	108	Right-handed alpha
Helix 33	AD6	C	125	149	Right-handed alpha
Helix 34	AD7	C	166	173	Right-handed alpha
Helix 35	AD8	C	190	197	Right-handed alpha
Helix 36	AD9	C	219	234	Right-handed alpha
Helix 37	AE1	C	246	249	Right-handed 310
Helix 38	AE2	C	250	255	Right-handed alpha
Helix 39	AE3	C	322	334	Right-handed alpha
Helix 40	AE4	C	334	361	Right-handed alpha
Helix 41	AE5	C	391	401	Right-handed alpha
Helix 42	AE6	C	430	451	Right-handed alpha
Helix 43	AE7	D	6	14	Right-handed alpha
Helix 44	AE8	D	38	54	Right-handed alpha
Helix 45	AE9	D	55	59	Right-handed 310
Helix 46	AF1	D	69	79	Right-handed alpha
Helix 47	AF2	D	90	108	Right-handed alpha
Helix 48	AF3	D	125	149	Right-handed alpha
Helix 49	AF4	D	166	173	Right-handed alpha
Helix 50	AF5	D	190	197	Right-handed alpha
Helix 51	AF6	D	219	234	Right-handed alpha
Helix 52	AF7	D	246	249	Right-handed 310
Helix 53	AF8	D	250	255	Right-handed alpha
Helix 54	AF9	D	322	359	Right-handed alpha
Helix 55	AG1	D	392	401	Right-handed alpha
Helix 56	AG2	D	430	451	Right-handed alpha
Helix 57	AG3	E	6	14	Right-handed alpha
Helix 58	AG4	E	38	54	Right-handed alpha
Helix 59	AG5	E	55	59	Right-handed 310
Helix 60	AG6	E	69	80	Right-handed alpha
Helix 61	AG7	E	90	108	Right-handed alpha
Helix 62	AG8	E	125	149	Right-handed alpha
Helix 63	AG9	E	163	173	Right-handed alpha
Helix 64	AH1	E	190	197	Right-handed alpha
Helix 65	AH2	E	220	234	Right-handed alpha
Helix 66	AH3	E	246	249	Right-handed 310
Helix 67	AH4	E	250	255	Right-handed alpha
Helix 68	AH5	E	322	334	Right-handed alpha
Helix 69	AH6	E	334	361	Right-handed alpha
Helix 70	AH7	E	392	401	Right-handed alpha
Helix 71	AH8	E	430	451	Right-handed alpha
Helix 72	AH9	F	6	14	Right-handed alpha
Helix 73	AI1	F	38	54	Right-handed alpha
Helix 74	AI2	F	55	59	Right-handed 310
Helix 75	AI3	F	69	79	Right-handed alpha
Helix 76	AI4	F	90	108	Right-handed alpha
Helix 77	AI5	F	125	149	Right-handed alpha
Helix 78	AI6	F	163	173	Right-handed alpha
Helix 79	AI7	F	190	197	Right-handed alpha
Helix 80	AI8	F	220	234	Right-handed alpha
Helix 81	AI9	F	246	249	Right-handed 310
Helix 82	AJ1	F	250	255	Right-handed alpha
Helix 83	AJ2	F	322	334	Right-handed alpha
Helix 84	AJ3	F	334	361	Right-handed alpha
Helix 85	AJ4	F	391	401	Right-handed alpha
Helix 86	AJ5	F	430	451	Right-handed alpha

There are 12 sheets in PDB entry 7JZH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	123	first strand
Strand 2	A	285	289	anti-parallel
Strand 3	A	267	273	anti-parallel
Strand 4	A	240	243	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	367	first strand
Strand 2	A	379	382	anti-parallel
Strand 3	A	419	422	anti-parallel
Strand 4	A	408	410	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	123	first strand
Strand 2	B	285	289	anti-parallel
Strand 3	B	267	273	anti-parallel
Strand 4	B	240	243	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	367	first strand
Strand 2	B	379	382	anti-parallel
Strand 3	B	419	422	anti-parallel
Strand 4	B	408	410	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	123	first strand
Strand 2	C	285	289	anti-parallel
Strand 3	C	267	273	anti-parallel
Strand 4	C	240	243	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	363	367	first strand
Strand 2	C	379	382	anti-parallel
Strand 3	C	419	422	anti-parallel
Strand 4	C	408	410	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	123	first strand
Strand 2	D	285	289	anti-parallel
Strand 3	D	267	273	anti-parallel
Strand 4	D	240	243	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	363	367	first strand
Strand 2	D	379	382	anti-parallel
Strand 3	D	419	422	anti-parallel
Strand 4	D	408	410	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	123	first strand
Strand 2	E	285	289	anti-parallel
Strand 3	E	267	273	anti-parallel
Strand 4	E	240	243	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	363	367	first strand
Strand 2	E	379	382	anti-parallel
Strand 3	E	419	422	anti-parallel
Strand 4	E	408	410	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	120	123	first strand
Strand 2	F	285	289	anti-parallel
Strand 3	F	267	273	anti-parallel
Strand 4	F	240	243	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	363	367	first strand
Strand 2	F	379	382	anti-parallel
Strand 3	F	419	422	anti-parallel
Strand 4	F	408	410	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7JZH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7JZH